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sw_8_scaffold_678

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_678_1
unknown

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1..459
DNA (459bp) protein (153aa)

This feature has no annotations

sw_8_scaffold_678_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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542..1879
DNA (1338bp) protein (446aa)
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:ERH09127.1}; EC=2.3.3.10 {ECO:0000313|EMBL:ERH09127.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="ha
mvaS; hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
hydroxymethylglutaryl-CoA synthase id=24647999 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
sw_8_scaffold_678_3
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1885..2592)
DNA (708bp) protein (236aa)
XRE family transcriptional regulator n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KGB9_HALAR
XRE family transcriptional regulator {ECO:0000313|EMBL:EMA18875.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula arg
hypothetical protein
sw_8_scaffold_678_4
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2684..3337)
DNA (654bp) protein (218aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=2 Tax=Halorubrum RepID=M0EKZ8_9EURY
3-isopropylmalate dehydratase small subunit {ECO:0000313|EMBL:ELZ47079.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
sw_8_scaffold_678_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3414..4826)
DNA (1413bp) protein (471aa)
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate is
3-isopropylmalate dehydratase large subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSF8_NATM8
sw_8_scaffold_678_6
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4823..5245)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BIG7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ09434.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
hypothetical protein
sw_8_scaffold_678_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5238..6251)
DNA (1014bp) protein (338aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hyd
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QT27_9EURY
sw_8_scaffold_678_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6244..6903)
DNA (660bp) protein (220aa)
acetolactate synthase small subunit (EC:2.2.1.6); K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] id=24646188 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Acetolactate synthase, small subunit {ECO:0000313|EMBL:ERH10367.1}; EC=2.2.1.6 {ECO:0000313|EMBL:ERH10367.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="h
ilvN; acetolactate synthase small subunit (EC:2.2.1.6)
sw_8_scaffold_678_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6904..8739)
DNA (1836bp) protein (612aa)
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] id=24646187 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic a
acetolactate synthase large subunit
sw_8_scaffold_678_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9144..10184)
DNA (1041bp) protein (347aa)
2-isopropylmalate synthase (EC:2.3.3.13) id=24649272 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
2-isopropylmalate synthase {ECO:0000313|EMBL:ERH10365.1}; EC=2.3.3.13 {ECO:0000313|EMBL:ERH10365.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
pyruvate carboxyltransferase
sw_8_scaffold_678_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10536..11663)
DNA (1128bp) protein (376aa)
ORC1-type DNA replication protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWX0_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
orc1/cdc6 family replication initiation protein
sw_8_scaffold_678_12
unknown

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11940..12134
DNA (195bp) protein (65aa)

This feature has no annotations

sw_8_scaffold_678_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12245..14158)
DNA (1914bp) protein (638aa)
DNA-binding protein MutS2 n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRG1_9EURY
DNA-binding protein MutS2 {ECO:0000256|HAMAP-Rule:MF_00971}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DNA mismatch repair protein mutS
sw_8_scaffold_678_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(14205..15818)
DNA (1614bp) protein (538aa)
Probable histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229};; TaxID=1210908 species="Archaea; E
histidine ammonia-lyase (EC:4.3.1.3)
Probable histidine ammonia-lyase n=1 Tax=Halogranum salarium B-1 RepID=J3EXD0_9EURY
sw_8_scaffold_678_15
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15815..17158)
DNA (1344bp) protein (448aa)
hutI; imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase {ECO:0000255|HAMAP-Rule:MF_00372}; EC=3.5.2.7 {ECO:0000255|HAMAP-Rule:MF_00372};; Imidazolone-5-propionate hydrolase {ECO:0000255|HAMAP-Rule:MF_00372}; TaxID=64091 species="Archa
Probable imidazolonepropionase n=2 Tax=Halobacterium salinarum RepID=HUTI_HALS3
sw_8_scaffold_678_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(17151..18149)
DNA (999bp) protein (333aa)
formiminoglutamase (EC:3.5.3.8)
Formimidoylglutamase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N948_9EURY
Formimidoylglutamase {ECO:0000313|EMBL:EMA53175.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 898
sw_8_scaffold_678_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18146..18448)
DNA (303bp) protein (101aa)
Probable urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577};; Imidazolonepropionate hydrolase {ECO
urocanate hydratase (EC:4.2.1.49)
Probable urocanate hydratase n=1 Tax=Halogranum salarium B-1 RepID=J3JG06_9EURY
sw_8_scaffold_678_18
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(18445..19875)
DNA (1431bp) protein (477aa)
Probable urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000313|EMBL:EMA31213.1};; Imidazo
Probable urocanate hydratase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LDL6_9EURY
urocanate hydratase
Displaying 18 items

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