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sw_8_scaffold_89_12

Organism: SW_8_Halobacteriales_66_22

near complete RP 33 / 55 MC: 5 BSCG 28 / 51 MC: 2 ASCG 31 / 38 MC: 1
Location: comp(8797..13173)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Replication factor C small subunit n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGH3_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 717.0
  • Bit_score: 1205
  • Evalue 0.0
Replication factor C small subunit {ECO:0000313|EMBL:CCQ33862.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tia similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 717.0
  • Bit_score: 1205
  • Evalue 0.0
replication factor C small subunit similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 717.0
  • Bit_score: 1205
  • Evalue 0.0

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Taxonomy

Halorhabdus tiamatea → Halorhabdus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 4377
ATGAGCGAGGCCGAACAGGCGGCGGGAGGCCGCGAGGAGATCTGGCTGGAGAAGTACCGCCCGCAGACGCTCGACGAGGTGGTCGGCCACGAGGCCATCATCGAGCGGCTGAAAAGCTACGTCGAGCGCGACGACCTGAACCACATGCTGTTCGCGGGGCCGGCCGGCGTGGGAAAATGTGCAACTGGCGAAACTCCAGTACTGACTGACAACGGTCTAGTCCGGATGGGGGAAGTCGTCAGAAGCGTTGACGGATTCAGCGAAAGCGAGGGCCTGGAGATACTCACGTTTAACAGGAACGGCGAGTTCGAGTACACCGAACCGTCTCACGTGTTCGGACGGGAAGCGGATGAACTCGTGGAGGTGGAAACGCGCGATGGCGCATCTCTCACCGTGACGCCGGAGCACAAACTCCTCGTCATTGAGGGGGATGGCCTGACGTGGCAACAGGCCTCGGAGATCGATGCCGGGGCCCGGATCGTGCGTCCGCTGTCAGCTCCTCTCCCCGACACTGACGAGAAAGTCGATTGGATCTCGGAGATGCATGGTGCCCGGACCTTCGTACACGTCAGCCCGGCGTTCGCCGACCGCCACGACATCCCCTTCGAGGAAAATCTCGTTGGCACGAAAAAAGAGGTCATCGGCCGTCTCCGTGCCGGGAAGAGTGTCGACGAAATAGACGAAACGCTTGACACTCCACGTAAAACGATCCGTTCTGCCGAGCGGGAGTTCAGAAACGAAAACCTCGATCGATGCAGCACAGTTTGTTCGCTTGCATATCTCCGTAAACTCGGTGTCTCCCGCGAGGAGCTCCGGCGGAATGTCGAAGCCATCGAGCACGTGACACGGACGAACAATCGAAGGTCCGGTCGAATCGAGCCGCCCTGGACGTTATCACCGGAGTTAACGGAGTTTGTCGGATTGGCCATTAGCGAGGCCCGAATCGATGGCGGCCGTCTCAAGTTCTACAACACGGACGAGACGCTGATCGAGCGATTCGACGAACTGGCCCGATCCCTGTTCGCCGTCGAACCGCGTCGGGGGGAAGAGGGTGAGGTTTCGTCCGTTGCAATCAGTAACAAAACGCTAACTGGGTATCTCGAATCCTGTTTTGACGTCTTCGAGAGTGCTGCAGGTGGAACAGGTATCGGATCGACCATCCTCACAGCTGACCGTGAAAGCCGTCGGAGGTTCCTGCGGGCGGTGTTCGACGCAGAGGCACACGTCCGGTCGAACGGGATAATTGAAGTTACTCAGAAGAACGGCTCACACATTACCCTTCTTTCGTACTTGCTCGCGGGGTTCGGAATTCCGTCCAGACGAAAGACGAAACGGAAAGCTGCAACGAACGGGAGTGGAATTGAACGGGAGTATCATACGTTATTGGTCTCAGGTGCACCCCACCTGGGAAGATTCCAAGAGAAAGTCGGGTTTTCCATCGATGAGAAGGCAGCGACCCTCGCGAAAGCGGTGGACAAAACAGGAAATCCAAACAACGATACGATCCCAAGACAGCGAGCGGTTGACGATCTGTGCGATCAACTTTACCTCACGAAAAGGGAGTATATCCCCGAGACATTGAACCCGGAAACGCCGGGGAGAGAACGGTACCTGTCATGCGTGTCTGACCTCGTCGGAGATGCGTCCGACAAACTCGAAGCAGTTCAGGAAGCCAGAGAAACGCTATCCGAACTTGAACCACTCGCTGAGGGGGTTTCTAAACTCCCGACAGAATGGGTAGCGGCTCGTGAGAAACTCGAACCACTCGCGGTGAGAAAAGAGGTGTCAGAAACGGTCGGGATCGATGGAAACAAACTGCTCAAGTATGCCTATGGGGATCATACACCCTATGCCAACCGCGTACAACGACTACTCAAGACGGTCGCTGATAGCGAATCTGTCCCGATAGAAACTCTCCAGTCGGAACTGCAGTCAATCATCGATCAGTTGCATATTCCGTACCGACGGATCGCAGATGGAACGCACCTGCGAGGAACGGACGTTCGTAACCTTCTCACCAACGATGATTTCAGTATCAAGTCACTTCCACGGTTCACTACGGTACTCGAAGAACTCGATACGGAACTGGCTCGGATGGCTTCTCTCGAAACGCTCGAGTCGCTCCACGCATTACACCGCTTGAGCACTGCGGATCTCTACCTGGACGAAGTCACTGAGGTTCGACAGACTGCGGAGCAACGTCGCGTGTATGATCTCACCGTCCCCGGATCACGGAACTACGTTGCAGGGACAGTGCCGACGGTGATGCACAATACCACATCGGCCATCGCCATCGCCCGGGAGCTGTACGGCGAGGACTGGGAGCAACAGTTCCTGGAGCTGAACGCCTCCGACGAGCGCGGGATCGACGTCGTCCGCGAACGGGTCAAGAGCTTCGCCCGCACCTCCTTCGGCGGGCCCAGCTACCGCATCATCTTCCTCGACGAGGCCGACGCGTTGTGTGTTCCGCCAGGAACTGAAGTTGTCACCGGATACCCGTCGTCACCGGAGGTGAAACGAATCGAAGACGTAGCTGAAGACGGGGAACCGATACCCTCTGTCGACTTCGACACGAACGAGGTTCAGTCAGACAAGGGGAAACTGGTTGACTCCGGCATTGCCGACTTCTTCGAAGTCGAACTGGCAGATGGACGGACGATTCTGGCAAGCCTTAGCCATCCATTCTTCGTCGTCGGGGAGGACGGGAGGCTCGTCGAGAAAGAGCTACAAGAACTGTCCCCAGGTGACGAGATCGCTGACATCAAGGATGATATCGGTGTTTCGCAGTGTGAACTGTGTGGAAACTGGACAGCAGGACGATTCTGTTCCCTCGCGTGCAAGGATGAGGGCCACAGTCTCGAGATGCAGGGAGAAAGCAATCCAATGCATGGAACAGAGTGGTCTGACGAGCGACGGGAAAAAATCGTCACAAAATTATCCGACGGAAGATTAGAAGGCGAAAACAATCCGAACTACGACGGTAATTTCCATGGAATCTCTATCTGGGAGATGGACGAAGAGGCGATCAACGAGTTCTGCGAGAAGATCAGCAGGAAACGATCGGGAACCTCGTGGGACGAGTGGGTCGTCGATGCCGATCCTGAAGCGGTAAAAGACCAAATCGGGCGCTCTTGCGCGGAGTGGTGGGACAGTTTAGACAATAACGAGAAAGAGAGACTAATCGAAAAAGCGACTGAAAACTGTGACTATCCTGTCTACGATATTACGGGAGACAACAACCCGATGCGTGATCCTGAGGTCGCAAAGAAAGTCTCGGAAGCACTGAAAGGTCACAGACCGACAGGAGGAAACATCAGACACAGTGACGAGCTGGGGCATCTGGTCCGATCCGACTGGGAATACGAGGTCGCAAAAGCATTGCAAGAAGCCGGAATTGAGTACGAGTATGAACCCGAGTTCAAGCTATCGGATTCGGTGTTCCATCCCGACTTCTTGATTGACGACACTGTTATCGAAGTCAAAGGGTCCGCTAAATTGTGGGGACAGACAGAGAAAGTCGAAGAATTTCTTGAGACCTACGGCGACGACTACCGATTCGTCGTCGTCGGCGACGAGGAACTCCCACATCACGACCATTACGAGAGGGATGAATTCGATCCTTCAGTCGTGTCAGATGGCGGGTTACGAACGGTCGATACCGTCGAGGTGAACAGCATCGAATACAGCCACCGTGGGAAGGCCTACAATATCAGTATGGAGGGAACACCCAACTTCATGCTGGGCAACGGAATATTGACTCACAACACCTCCGACGCCCAGTCGGCGCTCCGCCGGACGATGGAGCAGTTCTCGAACAACGTCCGCTTCATCCTCTCGTGTAACTACTCCTCGCAGATCATCGACCCGATCCAGTCCCGGTGTACCGTGTTCCGGTTCGCGCCGCTGTCCGACGACGCCGTCGAGGAGATGGTCCGGGAGATCGCCGGCAAGGAAGACATCGAAGTTACAGACGACGGCGTCGACGCGCTCGCCTACGTCGCGGGCGGGGACATGCGCGCGGCGATCAACGGGCTGCAGGCCGCCGCCGTGACCGGCCGGGTGGTCGACGAGGAGGCGGTGTTCGAGATCACCTCGACCGCCCGACCCGAGGACATCGAGGAGATGGTCACGCGCGCGCTCGACGGCGACTTCACCGCGGCGCGCTCGCAGCTGAACCGGTTGCTGACCGAGGAAGGGATCGCCGGCGGCGACATCATCGACCAGCTCCACCGCTCTGTGTGGGAGTTCGACCTCGACGACGAGGCGGCCGTCCGCCTGCTCGACCGCATCGGCGAGGCCGACTACCGGATCACCGCCGGCGCGAACGAACGGATCCAGCTCGAGGCCCTGCTCGCGTCGGTCGCGCTGGACGACTGA
PROTEIN sequence
Length: 1459
MSEAEQAAGGREEIWLEKYRPQTLDEVVGHEAIIERLKSYVERDDLNHMLFAGPAGVGKCATGETPVLTDNGLVRMGEVVRSVDGFSESEGLEILTFNRNGEFEYTEPSHVFGREADELVEVETRDGASLTVTPEHKLLVIEGDGLTWQQASEIDAGARIVRPLSAPLPDTDEKVDWISEMHGARTFVHVSPAFADRHDIPFEENLVGTKKEVIGRLRAGKSVDEIDETLDTPRKTIRSAEREFRNENLDRCSTVCSLAYLRKLGVSREELRRNVEAIEHVTRTNNRRSGRIEPPWTLSPELTEFVGLAISEARIDGGRLKFYNTDETLIERFDELARSLFAVEPRRGEEGEVSSVAISNKTLTGYLESCFDVFESAAGGTGIGSTILTADRESRRRFLRAVFDAEAHVRSNGIIEVTQKNGSHITLLSYLLAGFGIPSRRKTKRKAATNGSGIEREYHTLLVSGAPHLGRFQEKVGFSIDEKAATLAKAVDKTGNPNNDTIPRQRAVDDLCDQLYLTKREYIPETLNPETPGRERYLSCVSDLVGDASDKLEAVQEARETLSELEPLAEGVSKLPTEWVAAREKLEPLAVRKEVSETVGIDGNKLLKYAYGDHTPYANRVQRLLKTVADSESVPIETLQSELQSIIDQLHIPYRRIADGTHLRGTDVRNLLTNDDFSIKSLPRFTTVLEELDTELARMASLETLESLHALHRLSTADLYLDEVTEVRQTAEQRRVYDLTVPGSRNYVAGTVPTVMHNTTSAIAIARELYGEDWEQQFLELNASDERGIDVVRERVKSFARTSFGGPSYRIIFLDEADALCVPPGTEVVTGYPSSPEVKRIEDVAEDGEPIPSVDFDTNEVQSDKGKLVDSGIADFFEVELADGRTILASLSHPFFVVGEDGRLVEKELQELSPGDEIADIKDDIGVSQCELCGNWTAGRFCSLACKDEGHSLEMQGESNPMHGTEWSDERREKIVTKLSDGRLEGENNPNYDGNFHGISIWEMDEEAINEFCEKISRKRSGTSWDEWVVDADPEAVKDQIGRSCAEWWDSLDNNEKERLIEKATENCDYPVYDITGDNNPMRDPEVAKKVSEALKGHRPTGGNIRHSDELGHLVRSDWEYEVAKALQEAGIEYEYEPEFKLSDSVFHPDFLIDDTVIEVKGSAKLWGQTEKVEEFLETYGDDYRFVVVGDEELPHHDHYERDEFDPSVVSDGGLRTVDTVEVNSIEYSHRGKAYNISMEGTPNFMLGNGILTHNTSDAQSALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCTVFRFAPLSDDAVEEMVREIAGKEDIEVTDDGVDALAYVAGGDMRAAINGLQAAAVTGRVVDEEAVFEITSTARPEDIEEMVTRALDGDFTAARSQLNRLLTEEGIAGGDIIDQLHRSVWEFDLDDEAAVRLLDRIGEADYRITAGANERIQLEALLASVALDD*