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sw_8_scaffold_89

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_89_1
unknown

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comp(2..481)
DNA (480bp) protein (160aa)
membrane associated protein
sw_8_scaffold_89_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(767..1129)
DNA (363bp) protein (121aa)
hemK; protporphyrinogen oxidase id=24649022 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
HemK-related putative methylase {ECO:0000313|EMBL:ERH10157.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
prmC; methylase
sw_8_scaffold_89_3
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1218..1925)
DNA (708bp) protein (236aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000313|EMBL:ELZ21322.1};; 16S rRNA dimethyladenosine trans
ksgA; 16S rRNA methyltransferase (EC:2.1.1.-)
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CG32_9EURY
sw_8_scaffold_89_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1922..2497)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQB2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25450.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_8_scaffold_89_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2597..2953)
DNA (357bp) protein (119aa)
DNA-directed RNA polymerase subunit F n=1 Tax=Halomicrobium katesii RepID=UPI000379AE2E
RNA polymerase Rpb4
RNA polymerase Rpb4 {ECO:0000313|EMBL:ACV48779.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (str
sw_8_scaffold_89_6
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3082..4281)
DNA (1200bp) protein (400aa)
Alanyl-tRNA synthetase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KR72_HALAR
Alanyl-tRNA synthetase {ECO:0000313|EMBL:EMA23428.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM
alanyl-tRNA synthetase
sw_8_scaffold_89_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4330..4821)
DNA (492bp) protein (164aa)
Transcriptional regulator, XRE family n=1 Tax=halophilic archaeon J07HX64 RepID=U1QSP7_9EURY
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ERH08777.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DNA binding domain-containing protein
sw_8_scaffold_89_8
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4971..6287
DNA (1317bp) protein (439aa)
IS1341-type transposase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X102_9EURY
IS1341-type transposase {ECO:0000313|EMBL:ELY55400.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
transposase
sw_8_scaffold_89_9
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6393..6842
DNA (450bp) protein (150aa)
MaoC domain-containing protein dehydratase n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZSS3_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:ELY88238.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulun
MaoC domain-containing protein dehydratase
sw_8_scaffold_89_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6980..7837)
DNA (858bp) protein (286aa)
fbp; fructose-1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] id=24648593 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosph
fbp; fructose-1,6-bisphosphatase (EC:3.1.3.11)
sw_8_scaffold_89_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7844..8641)
DNA (798bp) protein (266aa)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:ERH09719.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ERH09719.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="haloph
fba1; fructose-bisphosphate aldolase, class I (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PHZ3_9EURY
sw_8_scaffold_89_12
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8797..13173)
DNA (4377bp) protein (1459aa)
Replication factor C small subunit n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGH3_9EURY
Replication factor C small subunit {ECO:0000313|EMBL:CCQ33862.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tia
replication factor C small subunit
sw_8_scaffold_89_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13296..13499
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P239_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47268.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_8_scaffold_89_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13664..15070)
DNA (1407bp) protein (469aa)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:ACV47266.1}; EC=5.4.2.8 {ECO:0000313|EMBL:ACV47266.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobiu
Phosphomannomutase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P237_HALMD
sw_8_scaffold_89_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15255..15440)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P235_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47264.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_8_scaffold_89_16
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15517..15723)
DNA (207bp) protein (69aa)
NCAIR mutase (PurE)-related protein n=2 Tax=Haloarcula hispanica RepID=G0HTK3_HALHT
cytochrome C
NCAIR mutase (PurE)-related protein {ECO:0000313|EMBL:AEM58569.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispa
sw_8_scaffold_89_17
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15895..16062
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Halorhabdus RepID=C7NV10_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12422.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_8_scaffold_89_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16176..16853)
DNA (678bp) protein (226aa)
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=485914 species="Archaea
Ribose-5-phosphate isomerase A n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P232_HALMD
sw_8_scaffold_89_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16984..17178
DNA (195bp) protein (65aa)
Like-Sm ribonucleoprotein core n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWK0_HALMD
snRNP
Like-Sm ribonucleoprotein core {ECO:0000313|EMBL:ACV48210.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muko
sw_8_scaffold_89_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17175..17345
DNA (171bp) protein (57aa)
50S ribosomal protein L37e n=1 Tax=Halogranum salarium B-1 RepID=J3A0Y9_9EURY
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halog
50S ribosomal protein L37
sw_8_scaffold_89_21
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17347..18786
DNA (1440bp) protein (480aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=2 Tax=Haloarcula hispanica RepID=G0HR67_HALHT
amidophosphoribosyltransferase
sw_8_scaffold_89_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18919..19281
DNA (363bp) protein (121aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N133_9EURY
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:EMA50395.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
iron-sulfur cluster assembly accessory protein
sw_8_scaffold_89_23

Not on your lists

19405..21333
DNA (1929bp) protein (643aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4XQY8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS10924.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_8_scaffold_89_24
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21400..21600)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W5B1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY38747.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
sw_8_scaffold_89_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21675..22136)
DNA (462bp) protein (154aa)
NADH dehydrogenase-like complex subunit I {ECO:0000313|EMBL:CAI49241.1}; EC=1.6.5.- {ECO:0000313|EMBL:CAI49241.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
NADH dehydrogenase-like complex subunit I n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRK2_NATPD
NADH-quinone oxidoreductase subunit I
sw_8_scaffold_89_26
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22180..23241)
DNA (1062bp) protein (354aa)
respiratory-chain NADH dehydrogenase subunit 1 (EC:1.6.99.5)
Respiratory-chain NADH dehydrogenase subunit 1 n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PHU1_9EURY
Respiratory-chain NADH dehydrogenase subunit 1 {ECO:0000313|EMBL:EMA69478.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
sw_8_scaffold_89_27
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23238..24917)
DNA (1680bp) protein (560aa)
NADH-ubiquinone oxidoreductase chain CD (EC:1.6.5.3)
NADH dehydrogenase-oxidoreductase protein {ECO:0000313|EMBL:ERJ07137.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ERJ07137.1};; NADH-ubiquinone oxidoreductase chain CD {ECO:0000313|EMBL:CCQ32759.1}; EC=1.6.5.3 {E
NADH dehydrogenase-oxidoreductase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP68_9EURY
sw_8_scaffold_89_28
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24914..25621)
DNA (708bp) protein (236aa)
NADH-quinone oxidoreductase, B subunit n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y981_9EURY
NADH-quinone oxidoreductase, B subunit {ECO:0000313|EMBL:ELY70262.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiform
NADH-quinone oxidoreductase, B subunit
sw_8_scaffold_89_29
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25624..26034)
DNA (411bp) protein (137aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 3 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4K8_HALMD
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
NADH-ubiquinone/plastoquinone oxidoreductase chain 3 {ECO:0000313|EMBL:ACV48030.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
sw_8_scaffold_89_30
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26137..26583)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZEX5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59225.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
transcriptional regulator
Displaying 30 items

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