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sw_8_scaffold_104

Search features with annotation key words

Displaying items 1-30 of 54 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_104_1
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..108
DNA (108bp) protein (36aa)
Fe3+-hydroxamate ABC transporter substrate-binding protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FH52_9EURY
Fe3+-hydroxamate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ58542.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sour
sw_8_scaffold_104_2
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

108..416
DNA (309bp) protein (103aa)
S-adenosylmethionine-dependent methyltransferase 3 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FF50_9EURY
S-adenosylmethionine-dependent methyltransferase 3 {ECO:0000313|EMBL:ELZ58545.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halo
SAM-dependent methyltransferase
sw_8_scaffold_104_3
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

Not on your lists

504..1610
DNA (1107bp) protein (369aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens RepID=F0XXV7_AURAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGB12011.1}; Flags: Fragment;; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anop
sw_8_scaffold_104_4
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1675..2133)
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Halorubrum RepID=M0DT06_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA71101.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
hypothetical protein
sw_8_scaffold_104_5
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2189..3244
DNA (1056bp) protein (352aa)
ABC transporter-related protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FF47_9EURY
ABC transporter-related protein {ECO:0000313|EMBL:ELZ58540.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium
ABC-type transport system ATP-binding protein
sw_8_scaffold_104_6
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3241..3972
DNA (732bp) protein (244aa)
ABC transporter permease n=1 Tax=Halorubrum sp. AJ67 RepID=V6DW49_9EURY
ABC transporter permease {ECO:0000313|EMBL:CDK40589.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
ABC-type transport system permease protein
sw_8_scaffold_104_7
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4077..4988
DNA (912bp) protein (304aa)
HpcH/HpaI aldolase {ECO:0000313|EMBL:CDK40587.1}; EC=4.1.3.24 {ECO:0000313|EMBL:CDK40587.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;"
HpcH/HpaI aldolase (EC:4.1.3.6)
HpcH/HpaI aldolase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DW34_9EURY
sw_8_scaffold_104_8
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5653..5913)
DNA (261bp) protein (87aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LRJ3_HALLT
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACM55816.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halo
sw_8_scaffold_104_9
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6042..9146
DNA (3105bp) protein (1035aa)
FAD linked oxidase (EC:1.1.2.4)
FAD linked oxidase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DT11_9EURY
FAD linked oxidase {ECO:0000313|EMBL:ELZ37264.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.
sw_8_scaffold_104_10
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9472..11253
DNA (1782bp) protein (594aa)
L-lactate permease n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NY95_9EURY
L-lactate permease {ECO:0000313|EMBL:EMA62811.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
L-lactate permease
sw_8_scaffold_104_11

Not on your lists

comp(11521..11976)
DNA (456bp) protein (152aa)
Acyl-CoA hydrolase n=1 Tax=uncultured archaeon A07HR67 RepID=V4X935_9ARCH
Acyl-CoA hydrolase {ECO:0000313|EMBL:ESS04284.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
thioesterase superfamily protein
sw_8_scaffold_104_12
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12149..12442
DNA (294bp) protein (98aa)
Uncharacterized protein n=3 Tax=Halorubrum RepID=M0DSP5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ37149.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
rhodopsin
sw_8_scaffold_104_13
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12572..13105
DNA (534bp) protein (178aa)
Transcriptional regulator n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PNK7_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EMA71094.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
transcriptional regulator
sw_8_scaffold_104_14
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13102..13539
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PMF7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA71093.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
hypothetical protein
sw_8_scaffold_104_15
unknown

Not on your lists

comp(13599..13742)
DNA (144bp) protein (48aa)

This feature has no annotations

sw_8_scaffold_104_16
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13971..14315)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Archaea RepID=U1NZK2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERH02974.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
sw_8_scaffold_104_17
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14316..14609)
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Archaea RepID=U1Q8S6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH02973.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
sw_8_scaffold_104_18
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14991..15392)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NV74_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV11158.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_8_scaffold_104_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15389..15667)
DNA (279bp) protein (93aa)
AbrB family transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR71_NATM8
AbrB family transcription regulator
AbrB/VapB family protein {ECO:0000313|EMBL:CCQ36723.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_8_scaffold_104_20
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16510..19191
DNA (2682bp) protein (894aa)
Putative signal peptide protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DYX5_9EURY
Putative signal peptide protein {ECO:0000313|EMBL:CDK40570.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_8_scaffold_104_21
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19474..21222
DNA (1749bp) protein (583aa)
PAS/PAC sensor protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FF25_9EURY
PAS/PAC sensor protein {ECO:0000313|EMBL:ELZ58515.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 7008
PAS/PAC sensor protein rbh
sw_8_scaffold_104_22
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21311..23485
DNA (2175bp) protein (725aa)
CoA-binding protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DSE8_9EURY
CoA-binding protein {ECO:0000313|EMBL:ELZ37024.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210
CoA-binding protein
sw_8_scaffold_104_23
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23478..24539
DNA (1062bp) protein (354aa)
DRTGG domain protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FGS2_9EURY
DRTGG domain protein {ECO:0000313|EMBL:ELZ58513.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873
DRTGG domain protein rbh
sw_8_scaffold_104_24
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24621..25622
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DNG5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ37026.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_104_25
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25657..26766)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FF21_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ58510.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein rbh
sw_8_scaffold_104_26
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26860..27582)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PNZ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA71239.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
hypothetical protein rbh
sw_8_scaffold_104_27
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27792..28748
DNA (957bp) protein (319aa)
radical SAM protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000381C2E8
Radical SAM protein {ECO:0000313|EMBL:ELZ45383.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100.;"
radical SAM protein
sw_8_scaffold_104_28
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29166..29462
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DXH1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40561.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_8_scaffold_104_29
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29490..30818)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DW38_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40559.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_8_scaffold_104_30
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30986..31981)
DNA (996bp) protein (332aa)
transcription initiation factor IIB 2 n=1 Tax=Halorubrum sp. T3 RepID=UPI000377DBB4
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
transcription factor TFIIB cyclin-related rbh
Displaying items 1-30 of 54 in total

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