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sw_8_scaffold_110

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_110_1
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..503
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NZM4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKF39052.1}; Flags: Fragment;; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sacch
hypothetical protein
sw_8_scaffold_110_2
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

500..2143
DNA (1644bp) protein (548aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NV95_9EURY
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EMA61179.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipo
glucose-methanol-choline oxidoreductase rbh
sw_8_scaffold_110_3
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2200..2943
DNA (744bp) protein (248aa)
Glycosyl transferase family 2 n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P8A9_9EURY
Glycosyl transferase family 2 {ECO:0000313|EMBL:EMA65794.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM
glycosyl transferase family 2
sw_8_scaffold_110_4
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2993..5218)
DNA (2226bp) protein (742aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P2H7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA62990.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein rbh
sw_8_scaffold_110_5
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5243..6373)
DNA (1131bp) protein (377aa)
Iron ABC transporter substrate-binding protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NTA4_9EURY
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMA61182.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
iron ABC transporter substrate-binding protein rbh
sw_8_scaffold_110_6
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6413..7594)
DNA (1182bp) protein (394aa)
Uncharacterized protein {ECO:0000313|EMBL:CDK39579.1}; EC=5.4.99.30 {ECO:0000313|EMBL:CDK39579.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubr
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DTP4_9EURY
hypothetical protein
sw_8_scaffold_110_7
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7625..8497)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FIB0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ58339.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_110_8
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8803..9363
DNA (561bp) protein (187aa)
Rhomboid family protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FE86_9EURY
Rhomboid family protein {ECO:0000313|EMBL:ELZ58341.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
rhomboid family protein
sw_8_scaffold_110_9
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9433..9741)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=13 Tax=Halorubrum RepID=M0D999_9EURY
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" so
rps10p; 30S ribosomal protein S10P
sw_8_scaffold_110_10
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9745..11010)
DNA (1266bp) protein (422aa)
elongation factor 1-alpha (EC:2.7.7.4)
Elongation factor 1-alpha n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DRZ0_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
sw_8_scaffold_110_11
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11201..11407)
DNA (207bp) protein (69aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FIB5_9EURY
Homoserine dehydrogenase {ECO:0000313|EMBL:ELZ37441.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM
sw_8_scaffold_110_12
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11418..12149)
DNA (732bp) protein (244aa)
homoserine dehydrogenase (EC:1.1.1.3)
homoserine dehydrogenase n=1 Tax=Halorubrum sp. T3 RepID=UPI000377000C
Homoserine dehydrogenase {ECO:0000313|EMBL:ELZ58344.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 70
sw_8_scaffold_110_13
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12158..12832)
DNA (675bp) protein (225aa)
Amino acid-binding ACT domain protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FEG9_9EURY
Amino acid-binding ACT domain protein {ECO:0000313|EMBL:ELZ58345.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochst
amino acid-binding ACT domain protein rbh
sw_8_scaffold_110_14
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13107..15254)
DNA (2148bp) protein (716aa)
Elongation factor 2 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FGH4_9EURY
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Halofe
elongation factor EF-2
sw_8_scaffold_110_15
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15532..16176
DNA (645bp) protein (215aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FG70_9EURY
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:ELZ58348.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae;
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase rbh
sw_8_scaffold_110_16
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16218..20309)
DNA (4092bp) protein (1364aa)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324, ECO:0000313|EMBL:ELZ58350.1}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324, ECO:000031
DNA polymerase II large subunit (EC:2.7.7.7) rbh
DNA polymerase II large subunit n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FEH4_9EURY
sw_8_scaffold_110_17
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20350..20769)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FE97_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK39572.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_8_scaffold_110_18
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21004..21381)
DNA (378bp) protein (126aa)
Nitrogen-fixing NifU domain protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DVI2_9EURY
Nitrogen-fixing NifU domain protein {ECO:0000313|EMBL:CDK39570.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67
nitrogen-fixing NifU domain protein
sw_8_scaffold_110_19
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21449..21778)
DNA (330bp) protein (110aa)
Uncharacterized protein n=3 Tax=Halorubrum RepID=M0D988_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ46497.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100
hypothetical protein
sw_8_scaffold_110_20
unknown

Not on your lists

21836..22018
DNA (183bp) protein (61aa)

This feature has no annotations

sw_8_scaffold_110_21
unknown

Not on your lists

comp(22348..23319)
DNA (972bp) protein (324aa)

This feature has no annotations

sw_8_scaffold_110_22
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23550..24320
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Halorubrum RepID=M0FQJ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ62250.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_110_23

Not on your lists

comp(24597..26759)
DNA (2163bp) protein (721aa)
Catalase-peroxidase {ECO:0000256|RuleBase:RU003451}; EC=1.11.1.21 {ECO:0000256|RuleBase:RU003451};; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
Catalase/peroxidase HPI n=1 Tax=uncultured archaeon A07HR60 RepID=V4YGY9_9ARCH
catalase/peroxidase HPI
sw_8_scaffold_110_24
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27181..28608)
DNA (1428bp) protein (476aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
Dihydrolipoyl dehydrogenase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DS70_9EURY
dihydrolipoamide dehydrogenase
sw_8_scaffold_110_25
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28646..30175)
DNA (1530bp) protein (510aa)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DSM8_9EURY
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:ELZ37697.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source=
branched-chain alpha-keto acid dehydrogenase subunit E2
sw_8_scaffold_110_26
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30263..31249)
DNA (987bp) protein (329aa)
Transketolase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DQB5_9EURY
Transketolase {ECO:0000313|EMBL:ELZ37696.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;"
transketolase
sw_8_scaffold_110_27
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31250..32353)
DNA (1104bp) protein (368aa)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit {ECO:0000313|EMBL:CDK39561.1}; EC=1.2.4.1 {ECO:0000313|EMBL:CDK39561.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Haloba
pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha (EC:1.2.4.1) rbh
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Halorubrum sp. AJ67 RepID=V6DTS1_9EURY
sw_8_scaffold_110_28
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32744..33148)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DVH4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK39560.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_8_scaffold_110_29
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33267..33917)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DS65_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ37693.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_110_30
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33918..34844)
DNA (927bp) protein (309aa)
Replication factor A n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NUY5_9EURY
Replication factor A {ECO:0000313|EMBL:EMA61049.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;"
replication factor A
Displaying items 1-30 of 83 in total

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