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sw_8_scaffold_163

Search features with annotation key words

Displaying items 1-30 of 53 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_163_1
unknown

Not on your lists

1..78
DNA (78bp) protein (26aa)

This feature has no annotations

sw_8_scaffold_163_2
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

79..504
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FD83_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ57202.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_163_3
unknown

Not on your lists

comp(613..1212)
DNA (600bp) protein (200aa)

This feature has no annotations

sw_8_scaffold_163_4
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1665..1847
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DXH8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ40206.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_163_5
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1877..2506)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DXD7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ40205.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_163_6
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3963..5063)
DNA (1101bp) protein (367aa)
DoxX family protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FD88_9EURY
DoxX family protein {ECO:0000313|EMBL:ELZ57207.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.
DoxX family protein rbh
sw_8_scaffold_163_7
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5157..5717)
DNA (561bp) protein (187aa)
Methyltransferase type 11 n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DZS1_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:ELZ40202.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM
methyltransferase type 11
sw_8_scaffold_163_8
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5806..6918)
DNA (1113bp) protein (371aa)
Aminotransferase class V n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FF09_9EURY
Aminotransferase class V {ECO:0000313|EMBL:ELZ57209.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 70
aminotransferase class V rbh
sw_8_scaffold_163_9
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7098..7382)
DNA (285bp) protein (95aa)
Translation initiation factor 1A n=5 Tax=Halorubrum RepID=M0DC51_9EURY
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
translation initiation factor aIF-1A
sw_8_scaffold_163_10
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7470..8183)
DNA (714bp) protein (238aa)
Kinase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E1I1_9EURY
Kinase {ECO:0000313|EMBL:ELZ40199.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;"
kinase
sw_8_scaffold_163_11
unknown

Not on your lists

comp(9132..9551)
DNA (420bp) protein (140aa)

This feature has no annotations

sw_8_scaffold_163_12
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9577..10209
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FD92_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ57212.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_163_13
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10256..11644)
DNA (1389bp) protein (463aa)
FAD dependent oxidoreductase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FD00_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:ELZ57213.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATC
FAD dependent oxidoreductase
sw_8_scaffold_163_14
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11801..12475
DNA (675bp) protein (225aa)
IS240-type transposase (ISH102) n=1 Tax=Halorubrum sp. AJ67 RepID=V6E035_9EURY
IS240-type transposase (ISH102) {ECO:0000313|EMBL:CDK39675.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
IS240-type transposase (ISH102)
sw_8_scaffold_163_15
unknown

Not on your lists

12494..12709
DNA (216bp) protein (72aa)

This feature has no annotations

sw_8_scaffold_163_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12696..13619
DNA (924bp) protein (308aa)
Formate/nitrite transporter n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBQ8_9EURY
Formate/nitrite transporter {ECO:0000313|EMBL:EMA54105.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensi
transporter
sw_8_scaffold_163_17
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13768..14517
DNA (750bp) protein (250aa)
IS240-type transposase (ISH102) n=1 Tax=Halorubrum sp. AJ67 RepID=V6DWD4_9EURY
IS240-type transposase (ISH102) {ECO:0000313|EMBL:CDK39675.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
IS240-type transposase (ISH102)
sw_8_scaffold_163_18
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14462..15817
DNA (1356bp) protein (452aa)
Transporter n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DXG9_9EURY
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;"
sodium:neurotransmitter symporter rbh
sw_8_scaffold_163_19
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15836..16492)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DXC9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ40195.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein rbh
sw_8_scaffold_163_20
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16844..17509)
DNA (666bp) protein (222aa)
Cytochrome C biogenesis protein transmembrane region n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E1H4_9EURY
Cytochrome C biogenesis protein transmembrane region {ECO:0000313|EMBL:ELZ40194.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
cytochrome C biogenesis protein transmembrane region
sw_8_scaffold_163_21
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17506..18042)
DNA (537bp) protein (179aa)
Putative signal peptide protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DVV8_9EURY
Putative signal peptide protein {ECO:0000313|EMBL:CDK40414.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
redoxin
sw_8_scaffold_163_22
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18039..18767)
DNA (729bp) protein (243aa)
Putative signal peptide protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DYG6_9EURY
Putative signal peptide protein {ECO:0000313|EMBL:CDK40413.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
electron transporter SCO1/SenC
sw_8_scaffold_163_23
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18976..19182
DNA (207bp) protein (69aa)
Cold-shock DNA-binding domain protein n=10 Tax=Halorubrum RepID=M0DC42_9EURY
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ELZ53925.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distri
cold-shock DNA-binding domain protein
sw_8_scaffold_163_24
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


19423..20130
DNA (708bp) protein (236aa)
DNA repair and recombination protein RadB n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FB92_9EURY
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350, ECO:0000313|EMBL:ELZ57220.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
radB; DNA repair and recombination protein RadB
sw_8_scaffold_163_25
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20262..21398)
DNA (1137bp) protein (379aa)
Signal transduction protein with CBS domains n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FB16_9EURY
Signal transduction protein with CBS domains {ECO:0000313|EMBL:ELZ57221.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
signal transduction protein with CBS domains
sw_8_scaffold_163_26
unknown

Not on your lists

21519..21692
DNA (174bp) protein (58aa)

This feature has no annotations

sw_8_scaffold_163_27
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21788..22621)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0K2H5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA14334.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
sw_8_scaffold_163_28
unknown

Not on your lists

comp(22813..23037)
DNA (225bp) protein (75aa)

This feature has no annotations

sw_8_scaffold_163_29
unknown

Not on your lists

23194..23355
DNA (162bp) protein (54aa)

This feature has no annotations

sw_8_scaffold_163_30
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23511..24188
DNA (678bp) protein (226aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FDA1_9EURY
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ELZ57222.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halo
HAD-superfamily hydrolase, subfamily IA, variant 1 rbh
Displaying items 1-30 of 53 in total

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