ggKbase home page

sw_8_scaffold_198

Search features with annotation key words

Displaying 29 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_198_1
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..1065
DNA (1065bp) protein (355aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E0S1_9EURY
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:ELZ40522.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorub
nucleic acid binding OB-fold tRNA/helicase-type
sw_8_scaffold_198_2
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1102..1758)
DNA (657bp) protein (219aa)
Ferredoxin n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DYB9_9EURY
Ferredoxin {ECO:0000313|EMBL:ELZ40520.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;"
ferredoxin
sw_8_scaffold_198_3
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1897..2874
DNA (978bp) protein (326aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FBJ2_9EURY
flap endonuclease-1
sw_8_scaffold_198_4
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3095..3478
DNA (384bp) protein (128aa)
Probable glycine cleavage system H protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E0I2_9EURY
Probable glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
glycine cleavage system protein H
sw_8_scaffold_198_5
unknown

Not on your lists

comp(3883..4002)
DNA (120bp) protein (40aa)

This feature has no annotations

sw_8_scaffold_198_6
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4727..6157
DNA (1431bp) protein (477aa)
Glycine dehydrogenase subunit 2 {ECO:0000313|EMBL:ELZ56710.1}; EC=1.4.4.2 {ECO:0000313|EMBL:ELZ56710.1};; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
glycine dehydrogenase subunit 2 (EC:1.4.4.2) rbh
Glycine dehydrogenase subunit 2 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F9T2_9EURY
sw_8_scaffold_198_7
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6472..7698
DNA (1227bp) protein (409aa)
Threonine synthase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E2G2_9EURY
Threonine synthase {ECO:0000313|EMBL:ELZ40514.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.
pyridoxal-5'-phosphate-dependent protein subunit beta rbh
sw_8_scaffold_198_8
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7779..8708
DNA (930bp) protein (310aa)
6-phosphogluconate dehydrogenase-like protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E0H7_9EURY
6-phosphogluconate dehydrogenase-like protein {ECO:0000313|EMBL:ELZ40513.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
6-phosphogluconate dehydrogenase-like protein
sw_8_scaffold_198_9
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9133..9462
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P2Q7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA64371.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_8_scaffold_198_10
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9959..10867
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DYB0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ40510.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein rbh
sw_8_scaffold_198_11
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10892..11287)
DNA (396bp) protein (132aa)
Rhodanese n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E2F8_9EURY
Rhodanese {ECO:0000313|EMBL:ELZ40509.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;"
rhodanese
sw_8_scaffold_198_12
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11287..11613)
DNA (327bp) protein (109aa)
Cupin n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F9Z6_9EURY
Cupin {ECO:0000313|EMBL:ELZ56856.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
cupin
sw_8_scaffold_198_13
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11676..12209)
DNA (534bp) protein (178aa)
ATP/cobalamin adenosyltransferase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ENI9_9EURY
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:ELZ49351.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense D
ATP/cobalamin adenosyltransferase
sw_8_scaffold_198_14
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12206..12445)
DNA (240bp) protein (80aa)
Glutaredoxin n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FE04_9EURY
Glutaredoxin {ECO:0000313|EMBL:ELZ56854.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
glutaredoxin-like protein
sw_8_scaffold_198_15
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12551..12949)
DNA (399bp) protein (133aa)
Thioesterase superfamily protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DYA7_9EURY
Thioesterase superfamily protein {ECO:0000313|EMBL:ELZ40505.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquiche
thioesterase superfamily protein
sw_8_scaffold_198_16
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13145..13642
DNA (498bp) protein (166aa)
Transcriptional regulator, AsnC family protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E2F3_9EURY
Transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:ELZ40504.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
Lrp/AsnC family transcription regulator
sw_8_scaffold_198_17
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13744..14760)
DNA (1017bp) protein (339aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F9Z1_9EURY
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:ELZ56851.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
cytosine deaminase-like metal-dependent hydrolase
sw_8_scaffold_198_18
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15003..16484
DNA (1482bp) protein (494aa)
pH adaptation potassium efflux system protein A n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E0Q4_9EURY
pH adaptation potassium efflux system protein A {ECO:0000313|EMBL:ELZ40502.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorub
phaA; pH adaptation potassium efflux system protein A rbh
sw_8_scaffold_198_19
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16474..18921
DNA (2448bp) protein (816aa)
UPF0753 protein C467_07482 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FDZ7_9EURY
UPF0753 protein C467_07482 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium A
hypothetical protein
sw_8_scaffold_198_20
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18943..19158)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6E062_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40985.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_8_scaffold_198_21
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19155..19565)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DXC0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40984.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_8_scaffold_198_22
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19562..21502)
DNA (1941bp) protein (647aa)
arsenic resistance protein ArsA (EC:3.6.3.16)
Arsenic resistance protein ArsA n=3 Tax=Halorubrum RepID=M0EVH1_9EURY
Arsenic resistance protein ArsA {ECO:0000313|EMBL:ELZ52258.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum
sw_8_scaffold_198_23
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21506..21931)
DNA (426bp) protein (142aa)
Arsenic resistance protein ArsD n=1 Tax=Halorubrum sp. AJ67 RepID=V6DYN9_9EURY
Arsenic resistance protein ArsD {ECO:0000313|EMBL:CDK40981.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
arsD1; transcription regulator ArsD
sw_8_scaffold_198_24
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22148..22543
DNA (396bp) protein (132aa)
MarR family transcriptional regulator n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DZP0_9EURY
MarR family transcriptional regulator {ECO:0000313|EMBL:ELZ40172.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenq
ArsR family transcription regulator
sw_8_scaffold_198_25
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22562..23563)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DYN4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40976.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
DUF318 family protein
sw_8_scaffold_198_26
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23560..23958)
DNA (399bp) protein (133aa)
ArsR family transcriptional regulator protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6E047_9EURY
ArsR family transcriptional regulator protein {ECO:0000313|EMBL:CDK40975.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
ArsR family transcription regulator
sw_8_scaffold_198_27
unknown

Not on your lists

comp(24266..24514)
DNA (249bp) protein (83aa)

This feature has no annotations

sw_8_scaffold_198_28
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24754..25158
DNA (405bp) protein (135aa)
Endoribonuclease L-PSP n=2 Tax=Halorubrum RepID=M0PS13_9EURY
Endoribonuclease L-PSP {ECO:0000313|EMBL:ELZ38646.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;
endoribonuclease L-PSP
sw_8_scaffold_198_29
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25262..26191
DNA (930bp) protein (310aa)
Arsenical-resistance protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DVU9_9EURY
Arsenical-resistance protein {ECO:0000313|EMBL:CDK40399.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
transport protein (probable substrate arsenite/heavy metals)
Displaying 29 items

View Taxonomy