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sw_8_scaffold_221

Search features with annotation key words

Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_221_1
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

220..1272
DNA (1053bp) protein (351aa)
Transcriptional regulator, TrmB n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E6V1_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ELZ42084.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichen
transcriptional regulator, TrmB rbh
sw_8_scaffold_221_2
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1491..2144)
DNA (654bp) protein (218aa)
ThiJ/PfpI domain protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E5A0_9EURY
ThiJ/PfpI domain protein {ECO:0000313|EMBL:ELZ42082.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM
ThiJ/PfpI domain protein
sw_8_scaffold_221_3
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2261..5491)
DNA (3231bp) protein (1077aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210, ECO:0000313|EMBL:ELZ42068.1};; Carbamoyl-phosphate synthetase ammonia chain {EC
Carbamoyl-phosphate synthase large chain n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E4V7_9EURY
carB; carbamoyl phosphate synthase large subunit rbh
sw_8_scaffold_221_4
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5586..5774
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F5Z0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ54019.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_221_5
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5791..6015)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DT51_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK38388.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_8_scaffold_221_6
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6154..6687)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EUX2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ50234.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_8_scaffold_221_7
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6793..6993)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E6T9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ42064.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
NPHP1 protein-like protein
sw_8_scaffold_221_8
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7021..9048)
DNA (2028bp) protein (676aa)
ATPase AAA (EC:3.6.4.6)
ATPase AAA n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E2V4_9EURY
ATPase AAA {ECO:0000313|EMBL:ELZ42106.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 19288.;"
sw_8_scaffold_221_9
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9158..9277)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DS59_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK38380.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
sw_8_scaffold_221_10
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9455..10864
DNA (1410bp) protein (470aa)
UPF0272 protein C472_00150 n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E2R4_9EURY
UPF0272 protein C467_12193 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium A
hypothetical protein
sw_8_scaffold_221_11
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


11795..13099
DNA (1305bp) protein (435aa)
Aspartyl-tRNA ligase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E6T7_9EURY
Aspartyl-tRNA ligase {ECO:0000313|EMBL:ELZ42059.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1421
aspartyl-tRNA synthetase rbh
sw_8_scaffold_221_12
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13376..13678
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F647_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ54099.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_221_13
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13680..14408
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E579_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ42057.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_221_14
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14697..15392)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E2Q9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ42056.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_221_15
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15441..15968)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F212_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ54096.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_221_16
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16015..16842)
DNA (828bp) protein (276aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1227481 species="Archaea; Euryarchaeota;
ATP-NAD/AcoX kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F2F8_9EURY
sw_8_scaffold_221_17
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17016..18554
DNA (1539bp) protein (513aa)
Circadian clock protein, KaiC n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E4U5_9EURY
Circadian clock protein, KaiC {ECO:0000313|EMBL:ELZ42053.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense
circadian clock protein, KaiC
sw_8_scaffold_221_18
unknown

Not on your lists

comp(18508..19167)
DNA (660bp) protein (220aa)

This feature has no annotations

sw_8_scaffold_221_trna_2
unknown

Not on your lists

comp(18900..18970)
DNA (71bp)
transferRNA
sw_8_scaffold_221_19
unknown

Not on your lists

19852..20391
DNA (540bp) protein (180aa)

This feature has no annotations

sw_8_scaffold_221_20
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20384..21424
DNA (1041bp) protein (347aa)
Putative rep protein (DUF1424) id=24618733 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Putative rep protein (DUF1424) {ECO:0000313|EMBL:ERH06340.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
sw_8_scaffold_221_21
unknown

Not on your lists

22215..22460
DNA (246bp) protein (82aa)

This feature has no annotations

sw_8_scaffold_221_22
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22457..22831
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FAJ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ55619.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
sw_8_scaffold_221_23
unknown

Not on your lists

comp(23305..23520)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_8_scaffold_221_24
unknown

Not on your lists

comp(23842..23979)
DNA (138bp) protein (46aa)

This feature has no annotations

sw_8_scaffold_221_25
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24005..25177)
DNA (1173bp) protein (391aa)
Phage integrase family domain-containing protein n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HPC1_9EURY
Phage integrase family domain-containing protein
Phage integrase family domain-containing protein {ECO:0000313|EMBL:ELZ86440.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofer
sw_8_scaffold_221_26
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25411..26844
DNA (1434bp) protein (478aa)
Peptidase M28 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F413_9EURY
Peptidase M28 {ECO:0000313|EMBL:ELZ54093.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
peptidase M28
sw_8_scaffold_221_27
unknown

Not on your lists

26897..27847
DNA (951bp) protein (317aa)

This feature has no annotations

sw_8_scaffold_221_28
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28118..28651
DNA (534bp) protein (178aa)
Transcriptional regulator n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F208_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ54091.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 7
transcriptional regulator, TrmB
sw_8_scaffold_221_29
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28653..29606)
DNA (954bp) protein (318aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F2F3_9EURY
truA; tRNA pseudouridine synthase A rbh
Displaying items 1-30 of 48 in total

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