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sw_8_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_239_1
unknown

Not on your lists

2..205
DNA (204bp) protein (68aa)

This feature has no annotations

sw_8_scaffold_239_2
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

359..937
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NNH9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDS91716.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
sw_8_scaffold_239_3
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1244..1540
DNA (297bp) protein (99aa)
DNA binding domain protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P6X4_9EURY
DNA binding domain protein {ECO:0000313|EMBL:EMA65558.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978
DNA binding domain protein
sw_8_scaffold_239_4
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1657..4179)
DNA (2523bp) protein (841aa)
PAS domain S-box n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NR67_9EURY
PAS domain S-box {ECO:0000313|EMBL:EMA59125.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;"
PAS domain S-box
sw_8_scaffold_239_5
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4439..5449
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NMV6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA59126.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
sw_8_scaffold_239_6
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5703..5924
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PCF1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA67837.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_8_scaffold_239_7
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5956..6306)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WVF2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY53430.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
sw_8_scaffold_239_8
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6530..7783
DNA (1254bp) protein (418aa)
Phosphonate metabolism protein PhnM n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NQK8_9EURY
Phosphonate metabolism protein PhnM {ECO:0000313|EMBL:EMA58930.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyti
phnM; phosphonate metabolism protein PhnM
sw_8_scaffold_239_9
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8178..8471
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NP31_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDS90371.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
sw_8_scaffold_239_10
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8851..10029
DNA (1179bp) protein (393aa)
Nucleoside-diphosphate-sugar pyrophosphorylase family protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P6T5_9EURY
Nucleoside-diphosphate-sugar pyrophosphorylase family protein {ECO:0000313|EMBL:EMA65513.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" s
Nucleoside-diphosphate-sugar pyrophosphorylase family protein
sw_8_scaffold_239_11
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10029..11840
DNA (1812bp) protein (604aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NLU5_9EURY
sw_8_scaffold_239_12
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12075..12716
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NNH9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA59351.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
sw_8_scaffold_239_13
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12731..13186)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NN24_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDS91715.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
sw_8_scaffold_239_14
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13784..14890
DNA (1107bp) protein (369aa)
Family 2 glycosyl transferase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P603_9EURY
Family 2 glycosyl transferase {ECO:0000313|EMBL:EMA65557.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14
family 2 glycosyl transferase
sw_8_scaffold_239_15
unknown

Not on your lists

comp(14842..15051)
DNA (210bp) protein (70aa)

This feature has no annotations

sw_8_scaffold_239_16
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15072..15488
DNA (417bp) protein (139aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NRV2_9EURY
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EMA59355.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyti
UDP-N-acetylglucosamine 2-epimerase
sw_8_scaffold_239_17
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15723..15971)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P468_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA64932.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
sw_8_scaffold_239_18
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16160..16357)
DNA (198bp) protein (66aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PPZ9_9EURY
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA72067.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JC
sw_8_scaffold_239_19
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16461..19100)
DNA (2640bp) protein (880aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DWC5_9EURY
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELZ39840.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
multi-sensor signal transduction histidine kinase rbh
sw_8_scaffold_239_20
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19523..21196
DNA (1674bp) protein (558aa)
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F1T1_9EURY
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:ELZ52589.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hoch
sw_8_scaffold_239_21
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21215..21931)
DNA (717bp) protein (239aa)
Formate/nitrite transporter n=1 Tax=Halorubrum sp. AJ67 RepID=V6DWI2_9EURY
Formate/nitrite transporter {ECO:0000313|EMBL:CDK39725.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
formate/nitrite transporter
sw_8_scaffold_239_22
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21954..22553
DNA (600bp) protein (200aa)
Methylmalonyl-CoA epimerase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DYE9_9EURY
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:ELZ39843.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense D
methylmalonyl-CoA epimerase
sw_8_scaffold_239_23
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22585..23634)
DNA (1050bp) protein (350aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NIX2_9EURY
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EMA57932.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
dipeptidyl aminopeptidase/acylaminoacyl peptidase
sw_8_scaffold_239_24
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23592..24635)
DNA (1044bp) protein (348aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DWD0_9EURY
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:ELZ39845.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
dipeptidyl aminopeptidase/acylaminoacyl peptidase
sw_8_scaffold_239_25
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24727..25218
DNA (492bp) protein (164aa)
Cyclase family protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DWH4_9EURY
Cyclase family protein {ECO:0000313|EMBL:ELZ39846.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14
cyclase family protein
sw_8_scaffold_239_26
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25413..25694
DNA (282bp) protein (94aa)
50S ribosomal protein L44e n=11 Tax=Halorubrum RepID=M0DKS2_9EURY
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476, ECO:0000313|EMBL:EMA64071.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sou
rpl44e; 50S ribosomal protein L44e
sw_8_scaffold_239_27
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25661..25870
DNA (210bp) protein (70aa)
30S ribosomal protein S27e n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DKW2_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000313|EMBL:ELZ36131.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sou
rps27e; 30S ribosomal protein S27e
sw_8_scaffold_239_28
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25889..26689
DNA (801bp) protein (267aa)
Translation initiation factor IF-2 subunit alpha n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E0G8_9EURY
Translation initiation factor IF-2 subunit alpha {ECO:0000313|EMBL:ELZ39849.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Haloru
translation initiation factor IF-2 subunit alpha rbh
sw_8_scaffold_239_29
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26988..27740
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DWK0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK39733.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein rbh
sw_8_scaffold_239_30
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27849..29015
DNA (1167bp) protein (389aa)
Thiolase n=2 Tax=Halorubrum distributum RepID=M0EX63_9EURY
Thiolase {ECO:0000313|EMBL:ELZ52444.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 10118.;"
thiolase
Displaying items 1-30 of 65 in total

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