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sw_8_scaffold_417

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_417_1
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

841..1692
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DT07_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK38343.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_8_scaffold_417_2
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1733..2017)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DN81_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35594.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_417_3
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2150..3037
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FS39_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ62128.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_417_4
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3098..4669
DNA (1572bp) protein (524aa)
Histidine kinase {ECO:0000313|EMBL:CDK38340.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CDK38340.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" so
Histidine kinase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DS21_9EURY
histidine kinase
sw_8_scaffold_417_5
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4704..5204)
DNA (501bp) protein (167aa)
Cyclase/dehydrase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DQ32_9EURY
Cyclase/dehydrase {ECO:0000313|EMBL:CDK38339.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
cyclase/dehydrase
sw_8_scaffold_417_6
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5295..6221
DNA (927bp) protein (309aa)
8-oxoguanine DNA glycosylase domain protein {ECO:0000313|EMBL:CDK38338.1}; EC=4.2.99.18 {ECO:0000313|EMBL:CDK38338.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
8-oxoguanine DNA glycosylase domain protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DT01_9EURY
8-oxoguanine DNA glycosylase domain protein
sw_8_scaffold_417_7
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6288..6686
DNA (399bp) protein (133aa)
UPF0212 protein C472_12311 n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DN77_9EURY
UPF0212 protein C472_12311 {ECO:0000256|HAMAP-Rule:MF_01223}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichens
hypothetical protein
sw_8_scaffold_417_8
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6765..7055)
DNA (291bp) protein (97aa)
Uncharacterized protein n=10 Tax=Halorubrum RepID=M0DLB4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ46637.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100
hypothetical protein
sw_8_scaffold_417_9
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7263..7442)
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Halorubrum RepID=M0DLK9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35587.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_417_10
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7582..7749)
DNA (168bp) protein (56aa)
Transcription initiation factor IIB n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DJC2_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
sw_8_scaffold_417_11
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7835..9163)
DNA (1329bp) protein (443aa)
amidase, hydantoinase/carbamoylase family (EC:3.5.1.87) rbh
Amidase, hydantoinase/carbamoylase family protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DN72_9EURY
Amidase, hydantoinase/carbamoylase family protein {ECO:0000313|EMBL:ELZ35584.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
sw_8_scaffold_417_12
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9228..9593)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FS47_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ62138.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
sw_8_scaffold_417_13
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9692..9901
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DLK4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35582.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
membrane protein
sw_8_scaffold_417_14
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9983..11011)
DNA (1029bp) protein (343aa)
Na+/Ca2+-antiporter n=1 Tax=Halorubrum sp. AJ67 RepID=V6DQ13_9EURY
Na+/Ca2+-antiporter {ECO:0000313|EMBL:CDK38327.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
sodium/calcium exchanger membrane region
sw_8_scaffold_417_15
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11016..12473)
DNA (1458bp) protein (486aa)
4-alpha-glucanotransferase {ECO:0000313|EMBL:ELZ62141.1}; EC=2.4.1.25 {ECO:0000313|EMBL:ELZ62141.1};; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloru
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FQ17_9EURY
sw_8_scaffold_417_16
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12559..13479)
DNA (921bp) protein (307aa)
Alpha amylase catalytic region n=2 Tax=Halorubrum distributum RepID=M0EIC4_9EURY
Alpha amylase catalytic region {ECO:0000313|EMBL:ELZ46647.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum J
alpha amylase catalytic region
sw_8_scaffold_417_17
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13446..14579)
DNA (1134bp) protein (378aa)
Alpha amylase catalytic region n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FSB3_9EURY
Alpha amylase catalytic region {ECO:0000313|EMBL:ELZ62142.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium A
alpha amylase catalytic region
sw_8_scaffold_417_18
unknown

Not on your lists

comp(14758..15099)
DNA (342bp) protein (114aa)

This feature has no annotations

sw_8_scaffold_417_19
unknown

Not on your lists

comp(15157..15618)
DNA (462bp) protein (154aa)

This feature has no annotations

sw_8_scaffold_417_20
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15716..19438
DNA (3723bp) protein (1241aa)
glycoside hydrolase 15-related (EC:3.2.1.3)
Glycoside hydrolase 15-related protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DLA6_9EURY
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:ELZ35578.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum teben
Displaying 20 items

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