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sw_8_scaffold_470

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_470_1
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(50..1306)
DNA (1257bp) protein (419aa)
Transposase n=2 Tax=Halorubrum distributum RepID=M0ECQ1_9EURY
Transposase {ECO:0000313|EMBL:ELZ45520.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100.;"
transposase
sw_8_scaffold_470_2
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1489..1923)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DH13_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34765.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
glycine-rich protein
sw_8_scaffold_470_3
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2023..3000)
DNA (978bp) protein (326aa)
Aldo/keto reductase {ECO:0000313|EMBL:CDK40835.1}; EC=1.1.1.317 {ECO:0000313|EMBL:CDK40835.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;
Aldo/keto reductase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DZP8_9EURY
aldo/keto reductase rbh
sw_8_scaffold_470_4
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3077..3274)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P9B9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA66626.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_8_scaffold_470_5
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3374..5110
DNA (1737bp) protein (579aa)
Cryptochrome/photolyase-related protein Phr3 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F7A9_9EURY
Cryptochrome/photolyase-related protein Phr3 {ECO:0000313|EMBL:ELZ55107.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
phr3; cryptochrome/photolyase-related protein Phr3
sw_8_scaffold_470_6
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5162..5407)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DJ63_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34762.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_470_7
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5471..5650)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F935_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ55109.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_470_8
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5747..6037
DNA (291bp) protein (97aa)
Translation initiation factor 1A n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DH09_9EURY
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
translation initiation factor IF-1A
sw_8_scaffold_470_9
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6349..7242
DNA (894bp) protein (298aa)
RimK domain protein ATP-grasp n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F520_9EURY
RimK domain protein ATP-grasp {ECO:0000313|EMBL:ELZ55111.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium AT
RimK domain protein ATP-grasp
sw_8_scaffold_470_10
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7271..7651)
DNA (381bp) protein (127aa)
HSP20 type chaperone n=1 Tax=Halorubrum sp. AJ67 RepID=V6DWV1_9EURY
HSP20 type chaperone {ECO:0000313|EMBL:CDK40842.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
HSP20 type chaperone
sw_8_scaffold_470_11
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7858..8910
DNA (1053bp) protein (351aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU003388, ECO:0000313|EMBL:ELZ35042.1}; EC=1.2.1.59 {ECO:0000256|RuleBase:RU003388};; TaxID=1227485 species="Archaea; Euryarchaeota; Halo
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DK28_9EURY
sw_8_scaffold_470_12
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9000..10166
DNA (1167bp) protein (389aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1227481 species="Archaea;
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F938_9EURY
sw_8_scaffold_470_13
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10240..10698)
DNA (459bp) protein (153aa)
AsnC family transcriptional regulator n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DLP2_9EURY
AsnC family transcriptional regulator {ECO:0000313|EMBL:ELZ35049.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenq
AsnC family transcriptional regulator
sw_8_scaffold_470_14
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10825..12195
DNA (1371bp) protein (457aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubru
glutamine synthetase (EC:6.3.1.2) rbh
Glutamine synthetase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F525_9EURY
sw_8_scaffold_470_15
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12720..13610)
DNA (891bp) protein (297aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F7B8_9EURY
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:ELZ55117.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
phosphoesterase PA-phosphatase related rbh
sw_8_scaffold_470_16
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13656..14969)
DNA (1314bp) protein (438aa)
Ribonuclease BN n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F723_9EURY
Ribonuclease BN {ECO:0000313|EMBL:ELZ55118.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
ribonuclease BN rbh
sw_8_scaffold_470_17
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15078..16208)
DNA (1131bp) protein (377aa)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:
N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F944_9EURY
sw_8_scaffold_470_18
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16403..17050
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DZS9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40848.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_8_scaffold_470_19
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17162..18559
DNA (1398bp) protein (466aa)
Amino acid transport protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NJE4_9EURY
Amino acid transport protein {ECO:0000313|EMBL:EMA58082.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM
cat5; transport protein (probable substrate cationic amino acids)
sw_8_scaffold_470_20
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18595..19302)
DNA (708bp) protein (236aa)
UspA domain protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PIU7_9EURY
UspA domain protein {ECO:0000313|EMBL:EMA69962.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
UspA domain protein
sw_8_scaffold_470_21
unknown

Not on your lists

19563..20105
DNA (543bp) protein (181aa)

This feature has no annotations

sw_8_scaffold_470_22
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20108..21148
DNA (1041bp) protein (347aa)
Integrase family protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8G2_HALXS
integrase protein
Integrase family protein {ECO:0000313|EMBL:AEH35585.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM
sw_8_scaffold_470_23
unknown

Not on your lists

21425..21727
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 23 items

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