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sw_8_scaffold_500

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_500_1
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..1335)
DNA (1335bp) protein (445aa)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ED36_9EURY
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:ELZ45665.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
phosphoenolpyruvate-protein phosphotransferase
sw_8_scaffold_500_2
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1332..1658)
DNA (327bp) protein (109aa)
Phosphocarrier, HPr family protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ECY9_9EURY
Phosphocarrier, HPr family protein {ECO:0000313|EMBL:ELZ45666.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense
phosphocarrier, HPr family
sw_8_scaffold_500_3
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1950..3152)
DNA (1203bp) protein (401aa)
Translation-associated GTPase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DT81_9EURY
Translation-associated GTPase {ECO:0000313|EMBL:CDK38730.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
translation-associated GTPase
sw_8_scaffold_500_4
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3341..3469)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DRB1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK38729.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
sw_8_scaffold_500_5
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3608..4195
DNA (588bp) protein (196aa)
UspA domain protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FS83_9EURY
UspA domain protein {ECO:0000313|EMBL:ELZ62178.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.
UspA domain protein
sw_8_scaffold_500_6
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4231..5220)
DNA (990bp) protein (330aa)
biotin/acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin--acetyl-CoA-carboxylase ligase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DJ89_9EURY
Biotin--acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:ELZ35546.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenq
sw_8_scaffold_500_7
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5298..5732
DNA (435bp) protein (145aa)
Ferredoxin n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DLH7_9EURY
Ferredoxin {ECO:0000313|EMBL:ELZ35547.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;"
2Fe-2S iron-sulfur cluster binding domain-containing protein
sw_8_scaffold_500_8
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5856..6419
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FQD9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ62175.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_500_9
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6546..7028
DNA (483bp) protein (161aa)
AsnC family transcriptional regulator n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FS79_9EURY
AsnC family transcriptional regulator {ECO:0000313|EMBL:ELZ62173.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochst
AsnC family transcriptional regulator rbh
sw_8_scaffold_500_10
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7046..7519)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DT76_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK38725.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_8_scaffold_500_11
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7590..8135)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FQ44_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ62171.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_500_12
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8208..9776)
DNA (1569bp) protein (523aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000256|HAMAP-Rule:MF_00588, ECO:0000313|EMBL:ELZ35553.1}; Short=Glu-ADT subunit E {ECO:0000256|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000256|HAMAP-
Glutamyl-tRNA(Gln) amidotransferase subunit E n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DL86_9EURY
glutamyl-tRNA(Gln) amidotransferase subunit E
sw_8_scaffold_500_trna_1
unknown

Not on your lists

comp(10416..10500)
DNA (85bp)
transferRNA
sw_8_scaffold_500_13
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10681..11241
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DN47_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35554.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_500_14
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11261..12349)
DNA (1089bp) protein (363aa)
Halocyanin domain protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DJD3_9EURY
Halocyanin domain protein {ECO:0000313|EMBL:ELZ35555.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM
halocyanin
sw_8_scaffold_500_15
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12473..13972)
DNA (1500bp) protein (500aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FSD5_9EURY
amidophosphoribosyltransferase rbh
sw_8_scaffold_500_16
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14080..14472)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DLI5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35557.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_500_17
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14563..16797)
DNA (2235bp) protein (745aa)
Fibronectin-binding A domain protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FQD1_9EURY
Fibronectin-binding A domain protein {ECO:0000313|EMBL:ELZ62165.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochste
Fibronectin-binding A domain protein rbh
sw_8_scaffold_500_18
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17144..17425)
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:ADD06538.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 4309
sw_8_scaffold_500_19
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17588..19282)
DNA (1695bp) protein (565aa)
histone acetyltransferase, ELP3 family (EC:2.3.1.48)
Histone acetyltransferase, ELP3 family protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FUA8_9EURY
Histone acetyltransferase, ELP3 family protein {ECO:0000313|EMBL:ELZ62164.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
sw_8_scaffold_500_20
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19532..21049
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FSD0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ62162.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_500_21

Not on your lists

comp(21071..21268)
DNA (198bp) protein (66aa)
Putative nucleic acid-binding protein, contains PIN domain protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4XPC0_9ARCH
Putative nucleic acid-binding protein, contains PIN domain protein {ECO:0000313|EMBL:ESS10299.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
PilT domain protein
sw_8_scaffold_500_22

Not on your lists

comp(21459..21731)
DNA (273bp) protein (91aa)
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y641_9ARCH
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:ESS10298.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
homolog to antitoxin VapB
sw_8_scaffold_500_23
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21855..22385)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DU21_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK38713.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein rbh
sw_8_scaffold_500_24
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22382..23347)
DNA (966bp) protein (322aa)
RNA methylase, NOL1/NOP2/sun family protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FQC7_9EURY
RNA methylase, NOL1/NOP2/sun family protein {ECO:0000313|EMBL:ELZ62160.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
RNA methylase, NOL1/NOP2/sun family rbh
sw_8_scaffold_500_25
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23371..24222)
DNA (852bp) protein (284aa)
Isochorismate synthase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FSC5_9EURY
Isochorismate synthase {ECO:0000313|EMBL:ELZ62157.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 7008
isochorismate synthase
sw_8_scaffold_500_26
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25400..26014)
DNA (615bp) protein (205aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DJA5_9EURY
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:ELZ35566.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
oxidoreductase molybdopterin binding
sw_8_scaffold_500_27
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26238..26453
DNA (216bp) protein (72aa)
Surface glycoprotein n=2 Tax=Halorubrum RepID=M0DLJ1_9EURY
Surface glycoprotein {ECO:0000313|EMBL:CDK38710.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
surface glycoprotein precursor
sw_8_scaffold_500_28
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26556..26834
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FUA0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ62154.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_500_29
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26949..28865
DNA (1917bp) protein (639aa)
Rhomboid family protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FS62_9EURY
Rhomboid family protein {ECO:0000313|EMBL:ELZ62153.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
rhomboid family protein
Displaying items 1-30 of 41 in total

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