ggKbase home page

sw_8_scaffold_527

Search features with annotation key words

Displaying items 1-30 of 59 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_527_1
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..187
DNA (186bp) protein (62aa)
cbiC; precorrin-8 methylmutase (EC:5.4.1.2)
Precorrin-8X methylmutase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F0H2_9EURY
Precorrin-8X methylmutase {ECO:0000313|EMBL:ELZ52667.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 7
sw_8_scaffold_527_2
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

184..966
DNA (783bp) protein (261aa)
cbiJ; cobalt-precorrin-6Y C(5)-methyltransferase (EC:2.1.1.132)
Cobalt-precorrin-6Y C(5)-methyltransferase n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DVS0_9EURY
Cobalt-precorrin-6Y C(5)-methyltransferase {ECO:0000313|EMBL:ELZ38209.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum t
sw_8_scaffold_527_3
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1041..1790)
DNA (750bp) protein (250aa)
Cobalamin (Vitamin B12) biosynthesis CbiX protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E089_9EURY
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:ELZ39764.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
cobalamin (vitamin B12) biosynthesis CbiX protein
sw_8_scaffold_527_4
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2054..2293
DNA (240bp) protein (80aa)
Nucleotide-binding protein, PIN domain-containing protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VS14_9EURY
Nucleotide-binding protein, PIN domain-containing protein {ECO:0000313|EMBL:ELY39018.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" sour
DNA-binding protein
sw_8_scaffold_527_5
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2207..3055)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EPK5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ49630.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_8_scaffold_527_6
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3052..3468)
DNA (417bp) protein (139aa)
6-pyruvoyl-tetrahydropterin synthase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ET83_9EURY
6-pyruvoyl-tetrahydropterin synthase {ECO:0000313|EMBL:ELZ49629.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriens
ptpS; 6-pyruvoyl tetrahydrobiopterin synthase
sw_8_scaffold_527_7
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3472..4485)
DNA (1014bp) protein (338aa)
tdh; oxidoreductase ( Zn-dependent dehydrogenases, threonine 3-dehydrogenase) (EC:1.1.1.103)
Oxidoreductase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ERB9_9EURY
Oxidoreductase {ECO:0000313|EMBL:ELZ49628.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;"
sw_8_scaffold_527_8
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4478..5269)
DNA (792bp) protein (264aa)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608, ECO:0000313|EMBL:ELZ49627.1}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608, ECO:0000313|EMBL:ELZ49627.1};; TaxID=1227466 species="Archaea; Eury
gch3; GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ERV5_9EURY
sw_8_scaffold_527_9
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5502..6881
DNA (1380bp) protein (460aa)
aslA1; sulfatase (EC:3.1.6.-)
Sulfatase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EPA7_9EURY
Sulfatase {ECO:0000313|EMBL:ELZ49626.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;"
sw_8_scaffold_527_10
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6890..7543)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EPK1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ49625.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_8_scaffold_527_11
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7580..8101)
DNA (522bp) protein (174aa)
Adaptin protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ET81_9EURY
Adaptin protein {ECO:0000313|EMBL:ELZ49624.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;"
adaptin n terminal region protein
sw_8_scaffold_527_12
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8228..8389)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ERB5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ49623.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
sw_8_scaffold_527_13
unknown

Not on your lists

8398..8535
DNA (138bp) protein (46aa)

This feature has no annotations

sw_8_scaffold_527_14
unknown

Not on your lists

comp(8517..8627)
DNA (111bp) protein (37aa)

This feature has no annotations

sw_8_scaffold_527_trna_2
unknown

Not on your lists

comp(8702..8776)
DNA (75bp)
transferRNA
sw_8_scaffold_527_15
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9108..9707
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DYK9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ39802.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein rbh
sw_8_scaffold_527_16
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9778..10200
DNA (423bp) protein (141aa)
CoA-binding protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0EY41_9EURY
CoA-binding protein {ECO:0000313|EMBL:ELZ39803.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210
CoA-binding protein
sw_8_scaffold_527_17
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10297..11157)
DNA (861bp) protein (287aa)
Pyridoxal-5'-phosphate-dependent protein subunit beta n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E0C6_9EURY
Pyridoxal-5'-phosphate-dependent protein subunit beta {ECO:0000313|EMBL:ELZ39804.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="H
pyridoxal-5'-phosphate-dependent protein subunit beta
sw_8_scaffold_527_18
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11374..13323
DNA (1950bp) protein (650aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1227481 species="Archaea; Eur
Threonine--tRNA ligase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0EZX9_9EURY
thrS; threonyl-tRNA synthetase rbh
sw_8_scaffold_527_19
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13332..14867)
DNA (1536bp) protein (512aa)
Multi-sensor signal transduction histidine kinase n=2 Tax=Halorubrum distributum RepID=M0EX17_9EURY
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELZ51422.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
multi-sensor signal transduction histidine kinase
sw_8_scaffold_527_20
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14978..16330
DNA (1353bp) protein (451aa)
aminotransferase class V (EC:2.6.1.44)
Aminotransferase class V n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0EXV0_9EURY
Aminotransferase class V {ECO:0000313|EMBL:ELZ52626.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 70
sw_8_scaffold_527_21
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16320..16550)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F1W3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ52624.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_527_22
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16626..17399)
DNA (774bp) protein (258aa)
Response regulator receiver protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DND0_9EURY
Response regulator receiver protein {ECO:0000313|EMBL:ELZ36333.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharo
response regulator receiver protein
sw_8_scaffold_527_23
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17448..19559)
DNA (2112bp) protein (704aa)
PAS/PAC sensor protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DNN7_9EURY
PAS/PAC sensor protein {ECO:0000313|EMBL:ELZ36332.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 113
PAS/PAC sensor protein
sw_8_scaffold_527_24
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19757..20812
DNA (1056bp) protein (352aa)
cellulase (EC:3.2.1.4)
Cellulase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0EZX4_9EURY
Cellulase {ECO:0000313|EMBL:ELZ52623.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
sw_8_scaffold_527_25
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20875..21174)
DNA (300bp) protein (100aa)
Transcriptional regulator, PadR-like family protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DYX3_9EURY
Transcriptional regulator, PadR-like family protein {ECO:0000313|EMBL:ELZ40696.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Hal
PadR family transcriptional regulator
sw_8_scaffold_527_26
unknown

Not on your lists

comp(21171..21365)
DNA (195bp) protein (65aa)

This feature has no annotations

sw_8_scaffold_527_27
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21453..21782
DNA (330bp) protein (110aa)
Phage PhiH1 repressor protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EDF8_9EURY
Phage PhiH1 repressor protein {ECO:0000313|EMBL:ELZ44917.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 1
homolog to phage PhiH1 repressor protein
sw_8_scaffold_527_28
unknown

Not on your lists

comp(21836..22084)
DNA (249bp) protein (83aa)

This feature has no annotations

sw_8_scaffold_527_29
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22129..22803)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IGH4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05136.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
Displaying items 1-30 of 59 in total

View Taxonomy