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sw_8_scaffold_110_54

Organism: SW_8_Halorubrum_68_21

near complete RP 32 / 55 MC: 4 BSCG 28 / 51 MC: 1 ASCG 37 / 38
Location: comp(57317..60001)

Top 3 Functional Annotations

Value Algorithm Source
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 892.0
  • Bit_score: 1323
  • Evalue 0.0
DNA-directed RNA polymerase subunit A n=1 Tax=Halorubrum sp. T3 RepID=UPI000370045C similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 894.0
  • Bit_score: 1565
  • Evalue 0.0
RNA polymerase A {ECO:0000313|EMBL:AIL25671.1}; TaxID=1537265 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. SP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 894.0
  • Bit_score: 1560
  • Evalue 0.0

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Taxonomy

Halorubrum sp. SP3 → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2685
ATGACTGAGTACGAGCACGTCACCGACGACATGGAGGCGGTCGTGGAGGCGACCGAGCTCCCCCGCCGCCTCAGAGACGAGGTGTACGAGGCGCTCGACCGCAAGGCCGAGGAGACCGGCGAGGTCACCATCGAGCAGGCGACCGATGTCGCCGAGGGCGTCCAGAACCGCTACGAGCAGACGCGGGTTGATCCTTTGGATCCTGTTGGGACTGTTTCTGCCCAATCGATCGGTGAGCCCGGAACTCAGATGAGCGTCCCCTACGACGAGCGCGTTGTCATCCGACAGAACGGCGAGACCGATGTCATCGAGATCGGCTCGCTCGTCGACGATGTGATCAGTTCCCACGATGTCCGAAACCTCGACGACCACGAGGTCGCGCTGGCTCCGGACGGACTGGAGACGCTGTCACTCGATGACGACGAGACCGCCCGATGGAAATCGATTGAGGAGGTGAGCCGCCACGAGACACCCGACGAGCTGCTCCGATTCGAACTCGAGTCTGGACGCTCGATCCGGGCGACGAAAGCCCACTCGTTCGTCACGCGACGCAACAACGACGTGGTACCCGTCGCTGGCGACGACCTCGACGTGGGCGATTGGCTGCCCGTCGCGGCGTCGTTCGACGCCGAGGAGACCGACGAGATAGACCTCCGGGAGTACCTTCCGGCGACCGACTACTGGTACACCTCGACGCTGACCGACGGCGGGGTCGAGACGGTACCCGGTGGGGAGGCGCAGCTCCAGAACAAGCGCGACGCGCTCGAAGCTGGCGAGATCGACGAGCATACTGTCTATCCGGCTGGCGGTACTGTCGGACTCCCCGAGCGGTTCCCACTGGACGCTGAGACCGGGTTCTTCGTCGGCGCGTGGCTCGCCGAAGGATCGCTCACGGACCACTACGTTTCGGTCTCGAACATCGACGAGACGTTCCAGGACGGCGTTCGCTCCTTCGCCGAGCGGTTCGACTTCACGGTCAACGAGTACGAGAACGACAGCGGGTTCGCTCGCGGCTACGACGTACGCGTGAACGGCACGATCCTCGCGGACTTCCTCCGTGCGGCGTGTACGGCGGGTGACGAGAAGGTCGTTCCCGGGTTCGCCTTCGGTGCCGACGAGGCGTTTGTTCGCGGTCTCCTCCGCGGGTACTTCAGTGGCGACGGAAACGTCGCGGACGCCGCCGTCCGATCCAGTTCGAGGAGCGCGCGACTCACGGCCGGCATCGCGATGTTGCTCGCCCGGTTCGACGTGTACGCGACGCTCGGCGAGCAGGACGGCTCGCGAACACTCCGAGTTCCGAAGAAACACGTTGGTCGGTTCACCGACCGCATCGGAATGGTCGGAGATCGCGGCGAGGAACTCGACTCGCTCGCGGCGGATCTGGACGCGGGCGGTCCCGACGCTACCGACCAGATCCCGAACTTCGGCGACGCGCTCCGTGAGGTCGCGTCGGACGCCGGGATACCGAGCCGGCAGGTCAACGCCGCGTCGAACCGCCAGCGTGTCGGTCGTTTACGGCTCGAACGGCTCGTCGACGACGCGGAGGCGGCGGGCGTCGAATCGGACGCACTCGATTCTCTCCGGCAGGCCGTCGTGGGCGACGTGGTCTGGGACCGGATCGAGTCGATCGAGACGGTCGAAAGCGAGTACGACCACGTCTACGACTTCTCGGTCGAGGGGCTGGAGACGTTCACGACTGCCGAGGGCGTCGTGACGCACAACACGATGAACACGTTCCACTACGCTGGCGTCGCAGAGATCGACGTCACGCAGGGGCTACCGCGGCTCATCGAGCTGGTGGACGCCCGGAAGACGCCGGACACGCCGATGATGACGGTGTACCTCGAAGACGAGTACGCGACCGACCGCGAGAAGGCCCACGAGGTCGTCTGGTCGATCGAGGCGACGCGCATCCTCGCGCTCGGCGACGTGTCGACGAACGTCGCGGACATGCTGGTCCGGATCGACCTGAACGACGACACGCTCTTAGAGCGGTGGCCGACCTACTCGAACCCCACCGAGATCGCCGAGATCATCGCGGAGACGATCGAGGACGCGCTCGGCGTCGACGCCCGGCAGTCGGGCACCGTGATCGAGTTCGGTCCCAACGAGCCGAGCTACCGCGAGCTGCTCCAGCTCGTCGAGCGGCTGCGCGAGATCGTGTTCAAGGGCATCGAGGAGATCGAACGCGTCGTCATCCGTAAAGAGGAGATCGACGGCGACGAGGAGTTCGTCCTCTACACCGAGGGGTCGGCGTTCGGCGACACCCTCGCGATAGAGGGCGTCGACGCCTCCCGGTCGACGTGTAACAACATCCACGAGATCTACCGGAACCTCGGCGTCGAGGCGGCCCGCGAGACCATCATCGATGAGACGAAGAACACGCTCGAAGAGCAGGGGCTCGACGACGTGAACGTCCGTCACCTCATGCTCGTCGCGGACATCATGACGAACAACGGCGAGATCGAGTCGATCGGCCGGCACGGCATCTCCGGCAACAAGGACTCGGTACTCGCGCGGGCGGCGTTCGAGGTGACGGTCAACCACCTGCTCGACGCCGCGATCCACGGCGAGTACGACGAGCTCGACGGCGTCATCGAGAACGTCATCGCCGGCAAGCCCATCTCGATGGGGACCGGCGACGTCGACCTCCGGATGGGGTCACGCGTCGTGAGCGACGACTAA
PROTEIN sequence
Length: 895
MTEYEHVTDDMEAVVEATELPRRLRDEVYEALDRKAEETGEVTIEQATDVAEGVQNRYEQTRVDPLDPVGTVSAQSIGEPGTQMSVPYDERVVIRQNGETDVIEIGSLVDDVISSHDVRNLDDHEVALAPDGLETLSLDDDETARWKSIEEVSRHETPDELLRFELESGRSIRATKAHSFVTRRNNDVVPVAGDDLDVGDWLPVAASFDAEETDEIDLREYLPATDYWYTSTLTDGGVETVPGGEAQLQNKRDALEAGEIDEHTVYPAGGTVGLPERFPLDAETGFFVGAWLAEGSLTDHYVSVSNIDETFQDGVRSFAERFDFTVNEYENDSGFARGYDVRVNGTILADFLRAACTAGDEKVVPGFAFGADEAFVRGLLRGYFSGDGNVADAAVRSSSRSARLTAGIAMLLARFDVYATLGEQDGSRTLRVPKKHVGRFTDRIGMVGDRGEELDSLAADLDAGGPDATDQIPNFGDALREVASDAGIPSRQVNAASNRQRVGRLRLERLVDDAEAAGVESDALDSLRQAVVGDVVWDRIESIETVESEYDHVYDFSVEGLETFTTAEGVVTHNTMNTFHYAGVAEIDVTQGLPRLIELVDARKTPDTPMMTVYLEDEYATDREKAHEVVWSIEATRILALGDVSTNVADMLVRIDLNDDTLLERWPTYSNPTEIAEIIAETIEDALGVDARQSGTVIEFGPNEPSYRELLQLVERLREIVFKGIEEIERVVIRKEEIDGDEEFVLYTEGSAFGDTLAIEGVDASRSTCNNIHEIYRNLGVEAARETIIDETKNTLEEQGLDDVNVRHLMLVADIMTNNGEIESIGRHGISGNKDSVLARAAFEVTVNHLLDAAIHGEYDELDGVIENVIAGKPISMGTGDVDLRMGSRVVSDD*