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sw_8_scaffold_1171

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1171_1
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2..1006)
DNA (1005bp) protein (335aa)
2-succinylbenzoate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_00731}; EC=6.2.1.26 {ECO:0000256|HAMAP-Rule:MF_00731};; o-succinylbenzoyl-CoA synthetase {ECO:0000256|HAMAP-Rule:MF_00731}; TaxID=662480 speci
menE; O-succinylbenzoic acid--CoA ligase (EC:6.2.1.26)
O-succinylbenzoic acid--CoA ligase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IPC5_9EURY
sw_8_scaffold_1171_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(999..2000)
DNA (1002bp) protein (334aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
Chloromuconate cycloisomerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CM43_9EURY
menC; O-succinylbenzoate-CoA synthase (OSB synthase; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase)
sw_8_scaffold_1171_3
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1997..2932)
DNA (936bp) protein (312aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};;
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=2 Tax=Haloarcula hispanica RepID=G0HRA9_HALHT
1,4-dihydroxy-2-naphthoate prenyltransferase
sw_8_scaffold_1171_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3222..4802)
DNA (1581bp) protein (527aa)
Homolog to elongator complex protein ELP3 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQR7_NATPD
protein acetyltransferase
Homolog to elongator complex protein ELP3 {ECO:0000313|EMBL:CAI49527.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronom
sw_8_scaffold_1171_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4886..7096)
DNA (2211bp) protein (737aa)
Putative nuclease/nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQF7_9EURY
Putative nuclease/nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:ELZ25471.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimp
RecJ domain protein
sw_8_scaffold_1171_6
unknown

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comp(7151..7351)
DNA (201bp) protein (67aa)

This feature has no annotations

sw_8_scaffold_1171_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7703..8524
DNA (822bp) protein (274aa)
succinylglutamate desuccinylase (EC:3.1.-.-)
Succinylglutamate desuccinylase/aspartoacylase family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ05_NATPD
Succinylglutamate desuccinylase/aspartoacylase family protein {ECO:0000313|EMBL:CAI49793.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_8_scaffold_1171_8
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8521..9147)
DNA (627bp) protein (209aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Halobacterium sp. DL1 RepID=G4ID75_9EURY
Short-chain dehydrogenase {ECO:0000313|EMBL:AHG03944.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
sw_8_scaffold_1171_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9281..9730)
DNA (450bp) protein (150aa)
UPF0179 protein C448_15381 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0LZA7_HALMO
UPF0179 protein C448_15381 {ECO:0000256|HAMAP-Rule:MF_00498}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae D
hypothetical protein
sw_8_scaffold_1171_10
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9788..10168)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HT65_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB66055.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_8_scaffold_1171_11
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10248..10622
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TXQ7_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB66060.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_8_scaffold_1171_12
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10670..12094
DNA (1425bp) protein (475aa)
Deoxyribodipyrimidine photolyase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MND5_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:EMA47166.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratiredu
phr_2; deoxyribodipyrimidine photolyase
sw_8_scaffold_1171_13
unknown

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comp(12091..12462)
DNA (372bp) protein (124aa)

This feature has no annotations

sw_8_scaffold_1171_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12541..14523)
DNA (1983bp) protein (661aa)
lfl; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3 6.2.1.-)
Acyl-CoA synthetase {ECO:0000313|EMBL:CAI50178.1}; EC=6.2.1.- {ECO:0000313|EMBL:CAI50178.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomona
Acyl-CoA synthetase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INX4_NATPD
sw_8_scaffold_1171_trna_1
unknown

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comp(14605..14679)
DNA (75bp)
transferRNA
Displaying 15 items

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