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sw_8_scaffold_178

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_178_1
unknown

Not on your lists

comp(2..199)
DNA (198bp) protein (66aa)

This feature has no annotations

sw_8_scaffold_178_2
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(726..1409)
DNA (684bp) protein (228aa)
gtl8; probable glycosyltransferase, type 2 (EC:2.4.-.-) id=24620324 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKF39054.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
family 2 glycosyl transferase
sw_8_scaffold_178_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1462..2067
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHN0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61121.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_8_scaffold_178_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2060..3085
DNA (1026bp) protein (342aa)
XerC/D-like integrase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPN8_NATPD
tyrosine recombinase
XerC/D-like integrase {ECO:0000313|EMBL:CAI49911.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_8_scaffold_178_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3288..3722)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYR3_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48602.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_8_scaffold_178_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3807..4853
DNA (1047bp) protein (349aa)
dph2; S-adenosyl-L-methionine:L-histidine 3-amino-3-carboxypropyltransferase (EC:2.5.1.-)
S-adenosyl-L-methionine:L-histidine 3-amino-3-carboxypropyltransferase {ECO:0000313|EMBL:CCQ36847.1}; EC=2.5.1.- {ECO:0000313|EMBL:CCQ36847.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacte
S-adenosyl-L-methionine:L-histidine 3-amino-3-carboxypropyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRK6_NATM8
sw_8_scaffold_178_7
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4969..5589
DNA (621bp) protein (207aa)
RNA methyltransferase n=1 Tax=Halorubrum sp. T3 RepID=UPI00035DF689
Methyltransferase small {ECO:0000313|EMBL:ELZ44392.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
probable rRNA methyltransferase
sw_8_scaffold_178_8
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5586..7214)
DNA (1629bp) protein (543aa)
Uncharacterized membrane protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMC2_HALBP
hypothetical protein
Uncharacterized membrane protein {ECO:0000313|EMBL:ADQ67327.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY28542.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofe
sw_8_scaffold_178_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7322..8521)
DNA (1200bp) protein (400aa)
Major facilitator superfamily protein n=3 Tax=Halococcus hamelinensis RepID=M0LRE9_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:EMA36172.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ha
sugar phosphate permease
sw_8_scaffold_178_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8643..9725)
DNA (1083bp) protein (361aa)
Aminoglycoside phosphotransferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTF5_9EURY
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EMA35679.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameli
hypothetical protein
sw_8_scaffold_178_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9814..10092)
DNA (279bp) protein (93aa)
Glutaredoxin n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPI1_NATPD
glx_3; glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:CAI49970.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATCC 3
sw_8_scaffold_178_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10339..11022)
DNA (684bp) protein (228aa)
HAD superfamily hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS49_NATPD
hypothetical protein
HAD superfamily hydrolase {ECO:0000313|EMBL:CAI49039.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (
sw_8_scaffold_178_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11019..11993)
DNA (975bp) protein (325aa)
hydrolase ( hydroxyacylglutathione hydrolase ) 11 (EC:3.1.2.6)
Hydrolase ( hydroxyacylglutathione hydrolase ) 11 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0H3_9EURY
Hydrolase ( hydroxyacylglutathione hydrolase ) 11 {ECO:0000313|EMBL:EMA51482.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
sw_8_scaffold_178_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12126..12911
DNA (786bp) protein (262aa)
dehydrogenase/reductase 5 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CAI49041.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI49041.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS47_NATPD
sw_8_scaffold_178_15
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12984..13538)
DNA (555bp) protein (185aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
msrA; peptide-methionine (S)-S-oxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X080_9EURY
sw_8_scaffold_178_16
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13635..15020
DNA (1386bp) protein (462aa)
norM; MATE efflux family protein id=24641493 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Putative efflux protein, MATE family {ECO:0000313|EMBL:ERH11548.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
norM; MATE efflux family protein
sw_8_scaffold_178_17
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15081..16796
DNA (1716bp) protein (572aa)
ilvB_2; thiamine pyrophosphate-requiring enzyme (acetolactate synthase 2, large subunit 2; benzoylformate decarboxylase ) (EC:2.2.1.6 4.1.1.7)
Thiamine pyrophosphate domain-containing TPP-binding protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X7V6_9EURY
Thiamine pyrophosphate domain-containing TPP-binding protein {ECO:0000313|EMBL:ELY57687.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;
sw_8_scaffold_178_18

Not on your lists

comp(16847..17593)
DNA (747bp) protein (249aa)
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20)
2-dehydro-3-deoxyglucarate aldolase {ECO:0000313|EMBL:AEN04543.1}; EC=4.1.2.20 {ECO:0000313|EMBL:AEN04543.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
2-dehydro-3-deoxyglucarate aldolase n=1 Tax=halophilic archaeon DL31 RepID=G2MIB6_9ARCH
sw_8_scaffold_178_19
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17632..19059)
DNA (1428bp) protein (476aa)
FAD/FMN-dependent dehydrogenase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VV86_9EURY
FAD/FMN-dependent dehydrogenase
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:AGN00181.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harc
sw_8_scaffold_178_20
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19127..19264)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0ACY2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY95208.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989
sw_8_scaffold_178_21
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19370..20125)
DNA (756bp) protein (252aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PLG0_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA70778.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidi
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
sw_8_scaffold_178_22
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20489..22036
DNA (1548bp) protein (516aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DBH6_9EURY
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:ELZ31509.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" sourc
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
sw_8_scaffold_178_23
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21983..22687)
DNA (705bp) protein (235aa)
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_02131}; Short=HPPK {ECO:0000256|HAMAP-Rule:MF_02131};; EC=2.7.6.3 {ECO:0000256|HAMAP-Rule:MF_02131};; 2-amino-4-hydroxy-6
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase n=1 Tax=Natronococcus occultus SP4 RepID=L0JYZ7_9EURY
putative Rossmann fold enzyme
sw_8_scaffold_178_24

Not on your lists

comp(22815..23942)
DNA (1128bp) protein (376aa)
Dihydropteroate synthase {ECO:0000313|EMBL:ESS08126.1}; EC=2.5.1.15 {ECO:0000313|EMBL:ESS08126.1};; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
Dihydropteroate synthase n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y609_9ARCH
dchpS; dihydropteroate synthase
sw_8_scaffold_178_25
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24136..24723
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQ90_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12816.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_8_scaffold_178_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24720..25454
DNA (735bp) protein (245aa)
RNA methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW34_9EURY
RNA methyltransferase {ECO:0000313|EMBL:ELZ27446.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
tRNA/rRNA methyltransferase
sw_8_scaffold_178_27
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25451..27313)
DNA (1863bp) protein (621aa)
gatE; glutamyl-tRNA(Gln) amidotransferase subunit E (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000255|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000255|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_00588};; TaxID=348780
Glutamyl-tRNA(Gln) amidotransferase subunit E n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=GATE_NATPD
sw_8_scaffold_178_28
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27359..28765)
DNA (1407bp) protein (469aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1210908 species="Archaea; Eurya
fumC; class II fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Halogranum salarium B-1 RepID=J3EVX2_9EURY
sw_8_scaffold_178_29
unknown

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comp(28898..29035)
DNA (138bp) protein (46aa)

This feature has no annotations

sw_8_scaffold_178_30
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29007..29810)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JQX7_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB33910.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
Displaying items 1-30 of 38 in total

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