ggKbase home page

sw_8_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 211 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_36_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..180)
DNA (180bp) protein (60aa)
Major facilitator superfamily protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LR68_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:EMA35583.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisal
MFS transporter
sw_8_scaffold_36_2
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(387..1127)
DNA (741bp) protein (247aa)
Putative transcriptional regulator, AsnC family protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JJN2_NATP1
transcriptional regulator
Putative transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:ELY77030.1}; Transcriptional regulator {ECO:0000313|EMBL:AGB30561.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacter
sw_8_scaffold_36_3
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1636..2322
DNA (687bp) protein (229aa)
TrkA-N domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JCT3_HALJB
Potassium transporter Trk {ECO:0000313|EMBL:KDS92179.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
TrkA-N domain protein
sw_8_scaffold_36_4
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2348..3973
DNA (1626bp) protein (542aa)
Cation transporter n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GAP6_9EURY
Cation transporter {ECO:0000313|EMBL:ELZ68592.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;"
cation transporter
sw_8_scaffold_36_5
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4092..4757
DNA (666bp) protein (222aa)
TrkA-N domain protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9Z934_9EURY
TrkA-N domain protein {ECO:0000313|EMBL:ELY82889.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
K+ transport system, NAD-binding component
sw_8_scaffold_36_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4760..5890
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HIU2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP89713.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_8_scaffold_36_7
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6026..7582
DNA (1557bp) protein (519aa)
Trk system potassium uptake protein TrkH n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DYP8_9EURY
Trk system potassium uptake protein TrkH {ECO:0000313|EMBL:ELZ40665.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sac
trkH3; trk system potassium uptake protein TrkH
sw_8_scaffold_36_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7726..8184)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG56_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44691.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_8_scaffold_36_9
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8225..8707)
DNA (483bp) protein (161aa)
act2; acyl-CoA thioester hydrolase (EC:3.1.2.-)
Acyl-CoA thioester hydrolase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H9X9_9EURY
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:ELZ81366.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 1391
sw_8_scaffold_36_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8833..9798
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4N4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52493.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_8_scaffold_36_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9795..10295
DNA (501bp) protein (167aa)
TraB family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR02_NATPD
hypothetical protein
TraB family protein {ECO:0000313|EMBL:CAI49442.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_8_scaffold_36_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10292..10918
DNA (627bp) protein (209aa)
metalloprotease (EC:3.4.24.-)
M50 family metalloprotease {ECO:0000313|EMBL:CAI49443.1}; EC=3.4.24.- {ECO:0000313|EMBL:CAI49443.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
M50 family metalloprotease n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR01_NATPD
sw_8_scaffold_36_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10962..11864
DNA (903bp) protein (301aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJR1_9EURY
sw_8_scaffold_36_14
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11899..12510
DNA (612bp) protein (204aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
Cytidylate kinase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E9H0_9EURY
cytidylate kinase
sw_8_scaffold_36_15
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12507..13046)
DNA (540bp) protein (180aa)
XRE family transcriptional regulator n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LGD7_9EURY
XRE family transcriptional regulator {ECO:0000313|EMBL:EMA32601.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisals
XRE family transcriptional regulator
sw_8_scaffold_36_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13089..13445)
DNA (357bp) protein (119aa)
UPF0212 protein NP_3468A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPX3_NATPD
hypothetical protein
UPF0212 protein NP_3468A {ECO:0000256|HAMAP-Rule:MF_01223}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_8_scaffold_36_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13671..14444
DNA (774bp) protein (258aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUR7_9EURY
proteasome endopeptidase complex, beta subunit
sw_8_scaffold_36_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14444..15178
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPW9_NATPD
topoisomerase cluster protein
Beta-lactamase domain protein {ECO:0000313|EMBL:CAI49829.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_8_scaffold_36_19
unknown

Not on your lists

comp(15180..15356)
DNA (177bp) protein (59aa)

This feature has no annotations

sw_8_scaffold_36_20
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15422..16768)
DNA (1347bp) protein (449aa)
Nitrilotriacetate monooxygenase family FMN-dependent oxidoreductase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HBW5_9EURY
Nitrilotriacetate monooxygenase family FMN-dependent oxidoreductase {ECO:0000313|EMBL:ESP88200.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candi
nitrilotriacetate monooxygenase family FMN-dependent oxidoreductase
sw_8_scaffold_36_21
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16815..18050)
DNA (1236bp) protein (412aa)
ATP-grasp protein-like protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MBD1_9EURY
ATP-grasp protein-like protein {ECO:0000313|EMBL:EMA41715.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireduce
ATP-grasp family protein
sw_8_scaffold_36_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18123..19226)
DNA (1104bp) protein (368aa)
DNA topoisomerase VI subunit A (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; TaxID=
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4J5_9EURY
sw_8_scaffold_36_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19226..21112)
DNA (1887bp) protein (629aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3)
DNA topoisomerase 6 subunit B (Intein-containing) {ECO:0000313|EMBL:CCQ36554.1}; EC=5.99.1.3 {ECO:0000313|EMBL:CCQ36554.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
DNA topoisomerase VI subunit B n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQZ8_NATM8
sw_8_scaffold_36_24
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21142..23268)
DNA (2127bp) protein (709aa)
DNA topoisomerase VI, subunit B n=1 Tax=Natronococcus occultus SP4 RepID=L0K1G7_9EURY
DNA topoisomerase VI, subunit B
DNA topoisomerase VI, subunit B {ECO:0000313|EMBL:AGB39157.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus
sw_8_scaffold_36_25
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23406..25319
DNA (1914bp) protein (638aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=268739 species="Archaea; Eur
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQV8_NATM8
sw_8_scaffold_36_26
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


25316..27796
DNA (2481bp) protein (827aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
DNA gyrase subunit A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPV7_NATPD
gyrA; DNA gyrase subunit A
sw_8_scaffold_36_27
unknown

Not on your lists

comp(27806..28087)
DNA (282bp) protein (94aa)

This feature has no annotations

sw_8_scaffold_36_28
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28160..28354
DNA (195bp) protein (65aa)
Heavy metal transport/detoxification protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRI8_HALUD
Heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ACV11924.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorh
sw_8_scaffold_36_29
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28351..29238)
DNA (888bp) protein (296aa)
Arginase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4Y1_HALJB
arginase
Arginase {ECO:0000313|EMBL:ADJ15598.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (strain DSM 1
sw_8_scaffold_36_30
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29271..30191)
DNA (921bp) protein (307aa)
galE; nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) (EC:5.1.3.2)
Nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HKP9_9EURY
Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) {ECO:0000313|EMBL:ELZ85130.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;"
Displaying items 1-30 of 211 in total

View Taxonomy