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sw_8_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 76 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1_1
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2..106)
DNA (105bp) protein (35aa)
Transposase {ECO:0000313|EMBL:CBN57095.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
sw_8_scaffold_1_2
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(326..451)
DNA (126bp) protein (42aa)
Photosystem II protein Y n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YY34_DACSA
Photosystem II protein Y (PsbY)
Photosystem II protein Y {ECO:0000256|HAMAP-Rule:MF_00717}; Flags: Precursor;; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactyloco
sw_8_scaffold_1_3
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(613..2514)
DNA (1902bp) protein (634aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YZ61_DACSA
dipeptidyl aminopeptidase/acylaminoacyl peptidase
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:AFZ51418.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylo
sw_8_scaffold_1_4
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

3119..4165
DNA (1047bp) protein (349aa)
Chlorophyll a/b binding light-harvesting protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T7N3_9CYAN
chlorophyll a/b binding light-harvesting protein
Chlorophyll a/b binding light-harvesting protein {ECO:0000313|EMBL:AFY78887.1}; Flags: Precursor;; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp.
sw_8_scaffold_1_5
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

4237..5298
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034C36CF
chlorophyll a/b binding light-harvesting protein
Chlorophyll a/b binding light-harvesting protein {ECO:0000313|EMBL:AFY78888.1}; Flags: Precursor;; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp.
sw_8_scaffold_1_6
unknown

Not on your lists

comp(5427..5588)
DNA (162bp) protein (54aa)

This feature has no annotations

sw_8_scaffold_1_7
unknown

Not on your lists

comp(5707..6291)
DNA (585bp) protein (195aa)

This feature has no annotations

sw_8_scaffold_1_trna_1
unknown

Not on your lists

comp(6504..6576)
DNA (73bp)
transferRNA
sw_8_scaffold_1_8
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6761..7369
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y9J4_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ43621.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
sw_8_scaffold_1_9
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7366..8367
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YSX5_DACSA
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFZ49460.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.
sw_8_scaffold_1_10
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8317..9876)
DNA (1560bp) protein (520aa)
ATP-dependent DNA helicase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBZ5_HALP7
ATP-dependent DNA helicase
ATP-dependent DNA helicase {ECO:0000313|EMBL:AFZ43623.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (str
sw_8_scaffold_1_11
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9928..10764
DNA (837bp) protein (279aa)
arogenate dehydrogenase (NADP) (EC:1.3.1.78) rbh
Arogenate dehydrogenase (NADP) {ECO:0000313|EMBL:AFZ43624.1}; EC=1.3.1.78 {ECO:0000313|EMBL:AFZ43624.1};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece
Arogenate dehydrogenase (NADP) n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y9T3_HALP7
sw_8_scaffold_1_12
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10860..11276
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YAM8_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ43455.1}; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Ha
sw_8_scaffold_1_13
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

11956..12210
DNA (255bp) protein (85aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XMK8_STAC7
UPF0161 protein yidD
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" sour
sw_8_scaffold_1_14
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

12244..13242
DNA (999bp) protein (333aa)
ABC transporter related protein n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XSD3_STAC7
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AFZ34994.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437)
sw_8_scaffold_1_15
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13438..14088
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034A46EC
glutathione S-transferase
Glutathione S-transferase domain protein {ECO:0000313|EMBL:AFZ43667.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halo
sw_8_scaffold_1_16
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14073..15089)
DNA (1017bp) protein (339aa)
thiamine-phosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
Thiamine-monophosphate kinase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YB80_HALP7
sw_8_scaffold_1_17
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15073..16260)
DNA (1188bp) protein (396aa)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YW16_DACSA
peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:AFZ51126.1}; Flags: Precursor;; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales;
sw_8_scaffold_1_18
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16390..17457)
DNA (1068bp) protein (356aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y8B7_HALP7
sugar ABC transporter ATP-binding protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:AFZ43094.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halo
sw_8_scaffold_1_19
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17496..18389)
DNA (894bp) protein (298aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y9K3_HALP7
carbohydrate ABC transporter membrane protein 2
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:AFZ43095.1}; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halot
sw_8_scaffold_1_20
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18393..19301)
DNA (909bp) protein (303aa)
Permease component of ABC-type sugar transporter n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YTX6_DACSA
sugar ABC transporter permease
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:AFZ50381.1}; Flags: Precursor;; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.
sw_8_scaffold_1_21
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(19306..20619)
DNA (1314bp) protein (438aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YV34_DACSA
sugar ABC transporter substrate-binding protein
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:AFZ50382.1}; Flags: Precursor;; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococc
sw_8_scaffold_1_22
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20637..21392)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YVM1_DACSA
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFZ50385.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.
sw_8_scaffold_1_23
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21486..22013)
DNA (528bp) protein (176aa)
Basic region leucine zipper n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YTY2_DACSA
Basic region leucine zipper
Basic region leucine zipper {ECO:0000313|EMBL:AFZ50386.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8
sw_8_scaffold_1_24
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22122..22361
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YCR7_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ44731.1}; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Ha
sw_8_scaffold_1_25
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22462..22671
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YW92_DACSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ50388.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.
sw_8_scaffold_1_26
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22678..23778
DNA (1101bp) protein (367aa)
Arsenite efflux ATP-binding protein ArsA n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y969_HALP7
arsenite efflux ATP-binding protein ArsA
Arsenite efflux ATP-binding protein ArsA {ECO:0000313|EMBL:AFZ43032.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halo
sw_8_scaffold_1_27
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23851..24852
DNA (1002bp) protein (334aa)
chlorophyll synthase (EC:2.5.1.62)
Chlorophyll synthase {ECO:0000313|EMBL:AFZ44466.1}; EC=2.5.1.62 {ECO:0000313|EMBL:AFZ44466.1};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; H
Chlorophyll synthase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBX8_HALP7
sw_8_scaffold_1_28
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24898..25917)
DNA (1020bp) protein (340aa)
Chaperone DnaJ domain protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YDB7_HALP7
chaperone DnaJ domain-containing protein
Chaperone DnaJ domain protein {ECO:0000313|EMBL:AFZ44467.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (
sw_8_scaffold_1_29
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26261..27145
DNA (885bp) protein (295aa)
UbiA prenyltransferase family protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YRZ2_DACSA
UbiA prenyltransferase family protein
UbiA prenyltransferase family protein {ECO:0000313|EMBL:AFZ49664.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis sa
Displaying items 1-30 of 76 in total

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