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sw_8_scaffold_1175

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1175_1
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..414)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PHH9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA69516.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_8_scaffold_1175_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

530..1027
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3T4_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13425.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_8_scaffold_1175_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1164..2552)
DNA (1389bp) protein (463aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NLN7_HALBP
sw_8_scaffold_1175_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2792..3415)
DNA (624bp) protein (208aa)
metalloprotease (EC:3.4.24.-)
Peptidase M50 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH55_9EURY
Peptidase M50 {ECO:0000313|EMBL:EMA44688.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
sw_8_scaffold_1175_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3483..4838)
DNA (1356bp) protein (452aa)
TraB family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4R9_HALJB
TraB family protein
TraB family protein {ECO:0000313|EMBL:ADJ15536.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (s
sw_8_scaffold_1175_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4965..5423)
DNA (459bp) protein (153aa)
Thioesterase superfamily protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3Q6_9EURY
Thioesterase superfamily protein {ECO:0000313|EMBL:EMA52491.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
thioesterase superfamily protein
sw_8_scaffold_1175_7
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5472..5807)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BPK0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA64303.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
sw_8_scaffold_1175_8
unknown

Not on your lists

comp(5804..5932)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_8_scaffold_1175_9
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5943..6200)
DNA (258bp) protein (86aa)
Transcriptional regulator, AbrB family protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E7G3_9EURY
Transcriptional regulator, AbrB family protein {ECO:0000313|EMBL:ELZ43761.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
transcriptional regulator, AbrB family
sw_8_scaffold_1175_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6336..7046)
DNA (711bp) protein (237aa)
MaoC domain-containing protein dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9M5_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:EMA42451.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
MaoC domain-containing protein dehydratase
sw_8_scaffold_1175_11
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7289..8047
DNA (759bp) protein (253aa)
Riboflavin kinase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W857_9EURY
riboflavin kinase
Riboflavin kinase {ECO:0000313|EMBL:AGN01508.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_8_scaffold_1175_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8049..8744
DNA (696bp) protein (232aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=797114 species
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Halomicrobium katesii RepID=UPI000367D1CA
3,4-dihydroxy-2-butanone 4-phosphate synthase
sw_8_scaffold_1175_13
unknown

Not on your lists

9157..9528
DNA (372bp) protein (124aa)

This feature has no annotations

sw_8_scaffold_1175_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9534..10079)
DNA (546bp) protein (182aa)
Molecular chaperone DnaJ n=3 Tax=Halococcus hamelinensis RepID=M0M6T9_9EURY
Molecular chaperone DnaJ {ECO:0000313|EMBL:EMA41507.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 10
heat shock protein DnaJ domain-containing protein
sw_8_scaffold_1175_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10200..10682)
DNA (483bp) protein (161aa)
NUDIX hydrolase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2S8_HALJB
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADJ15035.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (strai
sw_8_scaffold_1175_16
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10821..11168
DNA (348bp) protein (116aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NXK2_9EURY
glutamyl-tRNA(Gln) amidotransferase subunit C
sw_8_scaffold_1175_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11168..12670
DNA (1503bp) protein (501aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=122745
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNR2_9EURY
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
sw_8_scaffold_1175_18
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12766..13356)
DNA (591bp) protein (197aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JAR1_HALVA
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA05089.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
sugar ABC transporter ATP-binding protein
sw_8_scaffold_1175_19
unknown

Not on your lists

14012..14287
DNA (276bp) protein (92aa)

This feature has no annotations

sw_8_scaffold_1175_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14251..15639
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JDQ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57696.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
extracellular solute-binding protein family 1
sw_8_scaffold_1175_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15655..17472
DNA (1818bp) protein (606aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halogranum salarium B-1 RepID=J3ETY6_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EJN57697.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source
binding-protein-dependent transport systems inner membrane component
sw_8_scaffold_1175_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17524..18459)
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW89803.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
deacylase
Displaying 22 items

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