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sw_8_scaffold_1557

Search features with annotation key words

Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1557_1
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..303
DNA (303bp) protein (101aa)
(R)-citramalate synthase (EC:2.3.1.182)
(R)-citramalate synthase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E9H5_9EURY
(R)-citramalate synthase {ECO:0000313|EMBL:ELZ43713.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.
sw_8_scaffold_1557_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(425..1114)
DNA (690bp) protein (230aa)
Beta-lactamase domain-containing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D7P3_9EURY
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:ELZ31495.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeome
beta-lactamase domain-containing protein
sw_8_scaffold_1557_3
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1307..2095
DNA (789bp) protein (263aa)
Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YV03_9EURY
Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:GAD52840.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarc
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
sw_8_scaffold_1557_4
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2182..3108
DNA (927bp) protein (309aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SXN0_NATMM
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADD05979.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (stra
sw_8_scaffold_1557_5
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3273..4523
DNA (1251bp) protein (417aa)
Carbohydrate ABC transporter ATP-binding protein, cut1 family n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LE79_9EURY
Carbohydrate ABC transporter ATP-binding protein, cut1 family {ECO:0000313|EMBL:EMA30744.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" sou
ugpC1; sugar ABC transporter ATP-binding protein (UGPC)
sw_8_scaffold_1557_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4535..5821
DNA (1287bp) protein (429aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQ86_9EURY
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMA35732.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
tsgA7; sugar ABC transporter substrate-binding protein
sw_8_scaffold_1557_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5891..6847
DNA (957bp) protein (319aa)
Sugar ABC transporter permease n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRK7_9EURY
Sugar ABC transporter permease {ECO:0000313|EMBL:EMA35733.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
tsgB7; sugar ABC transporter permease
sw_8_scaffold_1557_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6849..7790
DNA (942bp) protein (314aa)
Sugar ABC transporter permease n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTK5_9EURY
Sugar ABC transporter permease {ECO:0000313|EMBL:EMA35734.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
binding-protein-dependent transport systems inner membrane component
sw_8_scaffold_1557_9
unknown

Not on your lists

9114..9854
DNA (741bp) protein (247aa)

This feature has no annotations

sw_8_scaffold_1557_10
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9851..11152
DNA (1302bp) protein (434aa)
YgbK domain-containing protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JDP4_9EURY
YgbK domain-containing protein {ECO:0000313|EMBL:EMA06468.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans AT
hypothetical protein
sw_8_scaffold_1557_11
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11149..12096
DNA (948bp) protein (316aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0ILR2_9EURY
4-hydroxythreonine-4-phosphate dehydrogenase 2 {ECO:0000313|EMBL:CQR52052.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
sw_8_scaffold_1557_12
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12457..13122)
DNA (666bp) protein (222aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BZD2_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ15447.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
short-chain dehydrogenase/reductase SDR
sw_8_scaffold_1557_13
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13752..14252)
DNA (501bp) protein (167aa)
Cupin 2 barrel domain-containing protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8K9_HALJB
Cupin 2 barrel domain-containing protein
Cupin 2 barrel domain-containing protein {ECO:0000313|EMBL:ELY36990.1}; Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADJ16255.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteri
sw_8_scaffold_1557_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14279..15130)
DNA (852bp) protein (284aa)
enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4F0_CONWI
sw_8_scaffold_1557_15
Thermus aquaticus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(15175..15561)
DNA (387bp) protein (129aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
enolase (EC:4.2.1.11)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00035DC1BC
sw_8_scaffold_1557_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15558..16646)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F5F81E
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ADB50521.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexi
sw_8_scaffold_1557_17
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16656..17342)
DNA (687bp) protein (229aa)
Branched chain amino acid ABC transporter ATP-binding protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W9Z1_9EURY
Branched chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELY46071.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;"
abc08a1; branched chain amino acid ABC transporter ATP-binding protein
sw_8_scaffold_1557_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17342..18091)
DNA (750bp) protein (250aa)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPZ2_NATPD
abc08a2; branched chain amino acid ABC transporter ATP-binding protein
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CAI49806.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
sw_8_scaffold_1557_19
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18088..19128)
DNA (1041bp) protein (347aa)
Branched-chain/neutral amino acids ABC transporter permease n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JFW9_9EURY
Branched-chain/neutral amino acids ABC transporter permease {ECO:0000313|EMBL:EMA07992.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sourc
abc08p2; branched-chain/neutral amino acids ABC transporter permease
sw_8_scaffold_1557_20
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19125..20048)
DNA (924bp) protein (308aa)
Branched-chain/neutral amino acids ABC transporter permease I n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JI23_9EURY
Branched-chain/neutral amino acids ABC transporter permease I {ECO:0000313|EMBL:EMA07993.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sou
abc08p1; branched-chain/neutral amino acids ABC transporter permease I
sw_8_scaffold_1557_21
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20055..21422)
DNA (1368bp) protein (456aa)
Extracellular ligand-binding receptor n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JJ63_9EURY
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EMA07994.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrifi
abc08s; branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein 4
sw_8_scaffold_1557_22
unknown

Not on your lists

22197..22952
DNA (756bp) protein (252aa)

This feature has no annotations

sw_8_scaffold_1557_23
unknown

Not on your lists

comp(23110..23283)
DNA (174bp) protein (58aa)

This feature has no annotations

sw_8_scaffold_1557_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23328..23450)
DNA (123bp) protein (41aa)
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCI69583.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_8_scaffold_1557_25
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23709..25349)
DNA (1641bp) protein (547aa)
Putative DNA helicase Rad25 {ECO:0000256|HAMAP-Rule:MF_01489}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01489};; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
DNA/RNA helicase, superfamily ii n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DJR6_9EURY
DNA/RNA helicase, superfamily ii
sw_8_scaffold_1557_26
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25714..26016)
DNA (303bp) protein (101aa)
Iron sulfur domain-containing, CDGSH-type n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QR26_9EURY
Iron sulfur domain-containing, CDGSH-type {ECO:0000313|EMBL:EFW92934.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladapt
Iron sulfur domain-containing
sw_8_scaffold_1557_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26178..26921)
DNA (744bp) protein (248aa)
Oxidoreductase-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9J7_9EURY
Oxidoreductase-like protein {ECO:0000313|EMBL:EMA54253.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
short-chain dehydrogenase/reductase SDR
sw_8_scaffold_1557_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27122..27373)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92702.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_8_scaffold_1557_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27707..28684)
DNA (978bp) protein (326aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
fen1; DNA repair flap endonuclease Fen1 (EC:3.-.-.-)
Flap endonuclease 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHD8_9EURY
sw_8_scaffold_1557_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28797..29399)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5X3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53281.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
Displaying items 1-30 of 34 in total

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