ggKbase home page

sw_8_scaffold_1718

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1718_1
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6..305)
DNA (300bp) protein (100aa)
Modification methylase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HZV1_9EURY
Modification methylase {ECO:0000313|EMBL:ELZ89257.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-8
modification methylase
sw_8_scaffold_1718_2
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(299..1762)
DNA (1464bp) protein (488aa)
Modification methylase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HZV1_9EURY
Modification methylase {ECO:0000313|EMBL:ELZ89257.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-8
modification methylase
sw_8_scaffold_1718_3
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1759..1926)
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ89258.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-
sw_8_scaffold_1718_4
unknown

Not on your lists

comp(2066..2440)
DNA (375bp) protein (125aa)

This feature has no annotations

sw_8_scaffold_1718_5

Not on your lists

2914..3204
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4X8Z9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS04239.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_8_scaffold_1718_6
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3433..3684
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JTB5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB36252.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_8_scaffold_1718_7
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3908..4621)
DNA (714bp) protein (238aa)
DUF1405 family protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GWI4_HALVD
hypothetical protein
DUF1405 family protein {ECO:0000313|EMBL:ADE02561.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY32778.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae;
sw_8_scaffold_1718_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4732..5778)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EWR7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59387.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_8_scaffold_1718_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5872..6780
DNA (909bp) protein (303aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGT8_9EURY
pyridoxal phosphate synthase yaad subunit
sw_8_scaffold_1718_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7576..8160
DNA (585bp) protein (195aa)
Probable glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473};; Phosphoglucose isomerase {ECO:000
Probable glucose-6-phosphate isomerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBK9_9EURY
glucose-6-phosphate isomerase
sw_8_scaffold_1718_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8123..8803
DNA (681bp) protein (227aa)
Probable glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473};; Phosphoglucose isomerase {ECO:000
Probable glucose-6-phosphate isomerase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8X6_HALJB
glucose-6-phosphate isomerase
sw_8_scaffold_1718_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8623..9711)
DNA (1089bp) protein (363aa)
Endoglucanase family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBF8_9EURY
Endoglucanase family protein {ECO:0000313|EMBL:EMA55196.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
endoglucanase family protein
sw_8_scaffold_1718_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10291..11541)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NAC6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53600.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_8_scaffold_1718_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11538..13757)
DNA (2220bp) protein (740aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N418_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52682.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
putative membrane protein (DUF2079)
Displaying 14 items

View Taxonomy