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sw_8_scaffold_1937

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1937_1
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..252
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRU5_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV13050.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_8_scaffold_1937_2
unknown

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602..868
DNA (267bp) protein (89aa)

This feature has no annotations

sw_8_scaffold_1937_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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918..1493
DNA (576bp) protein (192aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1227455 species="Archaea; Eury
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9I4_9EURY
Suspect SCG annotation. See neighboring gene [sw_8_scaffold_1937_4].
sw_8_scaffold_1937_4
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1545..2705
DNA (1161bp) protein (387aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=797302 species="Archaea; Eurya
Arginine--tRNA ligase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IE82_HALRX
arginyl-tRNA synthetase
sw_8_scaffold_1937_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2907..3329
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8D3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52910.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_8_scaffold_1937_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3368..3559
DNA (192bp) protein (64aa)
Transcription regulator-like protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N710_9EURY
Transcription regulator-like protein {ECO:0000313|EMBL:EMA52909.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus tha
DNA-binding protein
sw_8_scaffold_1937_7
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3629..4003
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0ILZ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ96878.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
sw_8_scaffold_1937_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4382..5533
DNA (1152bp) protein (384aa)
Sarcosine oxidase (EC:1.5.3.1); K00301 sarcosine oxidase [EC:1.5.3.1] id=24615283 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
N-methyltryptophan oxidase {ECO:0000313|EMBL:ESP87175.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Hal
glycine/d-amino acid oxidase, deaminating
sw_8_scaffold_1937_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7333..7797)
DNA (465bp) protein (155aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSG7_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW92376.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
putative DNA binding protein
sw_8_scaffold_1937_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8627..9382
DNA (756bp) protein (252aa)
Peptide chain release factor subunit 1 n=2 Tax=Haloquadratum walsbyi RepID=RF1_HALWD
erf1; peptide chain release factor 1
Peptide chain release factor subunit 1 {ECO:0000256|HAMAP-Rule:MF_00424}; Translation termination factor aRF1 {ECO:0000256|HAMAP-Rule:MF_00424}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacte
sw_8_scaffold_1937_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9742..10734
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N6S5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52390.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_8_scaffold_1937_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11013..11885
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXH3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90976.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_8_scaffold_1937_13
unknown

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comp(11921..12526)
DNA (606bp) protein (202aa)

This feature has no annotations

sw_8_scaffold_1937_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12817..13212)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDI9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42455.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_8_scaffold_1937_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13333..13596)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037C7DBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48811.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_8_scaffold_1937_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13699..14037)
DNA (339bp) protein (113aa)
Phosphatase, c-terminal domain of histone macro h2a1 like protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MGR6_HALMO
Phosphatase, c-terminal domain of histone macro h2a1 like protein {ECO:0000313|EMBL:EMA44523.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococc
hypothetical protein
sw_8_scaffold_1937_17
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14331..15152
DNA (822bp) protein (274aa)
Phosphoglycolate phosphatase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YD31_9EURY
Phosphoglycolate phosphatase {ECO:0000313|EMBL:GAD51556.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;
araL; L-arabinose operon protein
Displaying 17 items

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