ggKbase home page

sw_8_scaffold_2207

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_2207_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..445)
DNA (444bp) protein (148aa)
Dehydrogenase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NR23_HALBP
dehydrogenase
Dehydrogenase {ECO:0000313|EMBL:ELY30267.1}; Predicted dehydrogenase {ECO:0000313|EMBL:ADQ66759.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeome
sw_8_scaffold_2207_2
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(445..1410)
DNA (966bp) protein (322aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NR24_HALBP
sugar phosphate isomerase/epimerase
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:ADQ66760.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
sw_8_scaffold_2207_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1830..2387
DNA (558bp) protein (186aa)
Flavoprotein n=1 Tax=Halogranum salarium B-1 RepID=J3JFY6_9EURY
Flavoprotein {ECO:0000313|EMBL:EJN59631.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
flavoprotein
sw_8_scaffold_2207_4
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2487..2762)
DNA (276bp) protein (92aa)
Excinuclease ABC subunit C n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PCV5_9EURY
Excinuclease ABC subunit C {ECO:0000313|EMBL:EMA67866.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978
nuclease
sw_8_scaffold_2207_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2787..2945)
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0MDD4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55139.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_8_scaffold_2207_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3128..3793)
DNA (666bp) protein (222aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH33_9EURY
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:EMA43745.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
sw_8_scaffold_2207_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3938..4105
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4K5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA52872.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_8_scaffold_2207_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4250..5614
DNA (1365bp) protein (455aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P229_HALMD
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:ACV47258.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrob
sw_8_scaffold_2207_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6023..7369
DNA (1347bp) protein (449aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ73_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93137.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_8_scaffold_2207_10
unknown

Not on your lists

7410..7517
DNA (108bp) protein (36aa)

This feature has no annotations

sw_8_scaffold_2207_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7624..8118)
DNA (495bp) protein (165aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus
Phosphodiesterase, MJ0936 family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2L6_9EURY
phosphoesterase, mj0936 family
sw_8_scaffold_2207_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8433..8732
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M249_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39902.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_8_scaffold_2207_13
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8850..9200
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JEA1_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA06678.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_8_scaffold_2207_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9692..10087
DNA (396bp) protein (132aa)
CBS domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N660_9EURY
CBS domain-containing protein {ECO:0000313|EMBL:EMA53018.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailanden
CBS domain-containing protein
sw_8_scaffold_2207_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10356..11252)
DNA (897bp) protein (299aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01975};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01975};; EC=3.4.11.18 {
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0E4_9EURY
sw_8_scaffold_2207_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11257..12339)
DNA (1083bp) protein (361aa)
Beta-aspartyl-peptidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCA3_9EURY
Beta-aspartyl-peptidase {ECO:0000313|EMBL:EMA55582.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
beta-aspartyl-peptidase
sw_8_scaffold_2207_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12480..13700
DNA (1221bp) protein (407aa)
icd; isocitrate dehydrogenase (NADP+) (EC:1.1.1.42)
Isocitrate dehydrogenase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1K7_9EURY
Isocitrate dehydrogenase {ECO:0000313|EMBL:EMA50555.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis J
sw_8_scaffold_2207_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14026..16170
DNA (2145bp) protein (715aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:R
Catalase-peroxidase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM60_9EURY
catalase/peroxidase HPI
Displaying 18 items

View Taxonomy