ggKbase home page

sw_8_scaffold_3027

Search features with annotation key words

Displaying 11 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_3027_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..1362
DNA (1362bp) protein (454aa)
Thermosome n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8I0_9EURY
Thermosome {ECO:0000313|EMBL:EMA54267.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
thermosome
sw_8_scaffold_3027_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1486..2673)
DNA (1188bp) protein (396aa)
Thermosome subunit delta n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9L2_9EURY
Thermosome subunit delta {ECO:0000313|EMBL:EMA54268.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
ths_1; thermosome subunit 1 (alpha subunit)
sw_8_scaffold_3027_3

Not on your lists

comp(2670..3131)
DNA (462bp) protein (154aa)
Chaperonin GroEL (HSP60 family) n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZP69_9ARCH
Chaperonin GroEL (HSP60 family) {ECO:0000313|EMBL:ESS04380.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_8_scaffold_3027_4
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3231..4004)
DNA (774bp) protein (258aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39)
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X3D5_9EURY
Aldolase {ECO:0000313|EMBL:KDE56937.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
sw_8_scaffold_3027_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4175..5191)
DNA (1017bp) protein (339aa)
Ketol-acid reductoisomerase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JA38_HALJB
ketol-acid reductoisomerase
Ketol-acid reductoisomerase {ECO:0000313|EMBL:ADJ14560.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeo
sw_8_scaffold_3027_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5390..5911)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00035ED652
Uncharacterized protein {ECO:0000313|EMBL:ETW97539.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
mandelate racemase
sw_8_scaffold_3027_7
unknown

Not on your lists

5998..6306
DNA (309bp) protein (103aa)

This feature has no annotations

sw_8_scaffold_3027_8
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6941..7249
DNA (309bp) protein (103aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0AAV9_9EURY
PilT protein domain-containing protein
sw_8_scaffold_3027_9
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7664..8941
DNA (1278bp) protein (426aa)
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Halobacterium sp. DL1 RepID=G4IBZ6_9EURY
2-oxoacid dehydrogenase {ECO:0000313|EMBL:AHG04111.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
2-oxo acid dehydrogenase
sw_8_scaffold_3027_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8983..9909
DNA (927bp) protein (309aa)
Transketolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N964_9EURY
Transketolase {ECO:0000313|EMBL:EMA54421.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
2-oxoisovalerate dehydrogenase
sw_8_scaffold_3027_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10048..10410
DNA (363bp) protein (121aa)
dsa; branched-chain alpha-keto acid dehydrogenase subunit E2 (EC:2.3.1.-)
Dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IBZ8_9EURY
Dienelactone hydrolase {ECO:0000313|EMBL:AHG04109.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
Displaying 11 items

View Taxonomy