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sw_8_scaffold_366

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_366_1
unknown

Not on your lists

comp(2..166)
DNA (165bp) protein (55aa)

This feature has no annotations

sw_8_scaffold_366_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(365..1429)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50153.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_8_scaffold_366_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1571..2071
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYI1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50782.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_8_scaffold_366_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2477..3160)
DNA (684bp) protein (228aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1227455 species=
nthA; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLA9_9EURY
sw_8_scaffold_366_5

Not on your lists

3332..4102
DNA (771bp) protein (257aa)
Uncharacterized protein n=3 Tax=Archaea RepID=B9LVG6_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07688.1}; Flags: Precursor;; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_8_scaffold_366_6
unknown

Not on your lists

comp(4274..4552)
DNA (279bp) protein (93aa)

This feature has no annotations

sw_8_scaffold_366_trna_1
unknown

Not on your lists

comp(4735..4837)
DNA (103bp)
transferRNA
sw_8_scaffold_366_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4991..5431)
DNA (441bp) protein (147aa)
DtxR family iron (Metal) dependent repressor n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1Y7_9EURY
DtxR family iron (Metal) dependent repressor {ECO:0000313|EMBL:EMA50720.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
iron dependent repressor
sw_8_scaffold_366_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5478..5954)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P115_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV49030.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_8_scaffold_366_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6072..7331)
DNA (1260bp) protein (420aa)
SufBD protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYB9_9EURY
SufBD protein {ECO:0000313|EMBL:EMA50722.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
Iron-regulated ABC transporter permease protein SufD
sw_8_scaffold_366_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7441..8874)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJF4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45837.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sufB_3; Fe-S cluster assembly protein ABC transporter permease
sw_8_scaffold_366_11
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9016..9936)
DNA (921bp) protein (307aa)
FeS assembly ATPase SufC n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BT33_9EURY
FeS assembly ATPase SufC {ECO:0000313|EMBL:ELZ13277.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 1389
yurF; ABC transporter ATP-binding protein
sw_8_scaffold_366_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10126..12849)
DNA (2724bp) protein (908aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
DNA polymerase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1Q9_9EURY
DNA polymerase elongation subunit (family b)
sw_8_scaffold_366_13
unknown

Not on your lists

13125..13310
DNA (186bp) protein (62aa)

This feature has no annotations

sw_8_scaffold_366_14
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13397..13810
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HFJ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ83306.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
hypothetical protein
sw_8_scaffold_366_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13910..14371
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXY9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27312.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_8_scaffold_366_16
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14501..15712
DNA (1212bp) protein (404aa)
Proteasome-activating nucleotidase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPG1_HALMO
peptidase
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
sw_8_scaffold_366_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15886..16026
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:EJN60484.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_8_scaffold_366_18
unknown

Not on your lists

16305..16472
DNA (168bp) protein (56aa)

This feature has no annotations

sw_8_scaffold_366_19
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16604..17545
DNA (942bp) protein (314aa)
Acyltransferase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NL29_HALBP
acyltransferase
Acyltransferase {ECO:0000313|EMBL:ELY29729.1}; Predicted acyltransferase {ECO:0000313|EMBL:ADQ67181.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halog
sw_8_scaffold_366_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17572..18753
DNA (1182bp) protein (394aa)
Translation-associated GTPase n=1 Tax=Halogranum salarium B-1 RepID=J2ZK87_9EURY
Translation-associated GTPase {ECO:0000313|EMBL:EJN61135.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ychF; translation-associated GTPase
sw_8_scaffold_366_21
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18784..19029)
DNA (246bp) protein (82aa)
Zinc finger, C2H2 type {ECO:0000313|EMBL:ERH00421.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
Displaying 22 items

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