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sw_8_scaffold_396

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_396_1
unknown

Not on your lists

comp(1..171)
DNA (171bp) protein (57aa)

This feature has no annotations

sw_8_scaffold_396_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

305..1522
DNA (1218bp) protein (406aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
Glycerol-3-phosphate-transporting ATPase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MR31_9EURY
Glycerol-3-phosphate-transporting ATPase {ECO:0000313|EMBL:EMA48182.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sw_8_scaffold_396_3
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1686..2453)
DNA (768bp) protein (256aa)
Transcription initiation factor IIB n=3 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ACS8_NATGS
transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrial
sw_8_scaffold_396_4
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3555..3944)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KIN8_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA20783.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
sw_8_scaffold_396_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4175..4987
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPX1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93011.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_8_scaffold_396_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4987..5784
DNA (798bp) protein (266aa)
Mechanosensitive ion channel n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MY27_9EURY
Mechanosensitive ion channel {ECO:0000313|EMBL:EMA50223.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandens
mechanosensitve ion channel protein
sw_8_scaffold_396_7
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6212..6457
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L2V5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA27907.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
sw_8_scaffold_396_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6454..8709
DNA (2256bp) protein (752aa)
ATPase AAA n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MY70_9EURY
ATPase AAA {ECO:0000313|EMBL:EMA50268.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
AAA family ATPase, CDC48 subfamily
sw_8_scaffold_396_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9106..10935)
DNA (1830bp) protein (610aa)
ATPase RIL n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D670_9EURY
ATPase RIL {ECO:0000313|EMBL:ELZ30353.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
ATPase RIL
sw_8_scaffold_396_10
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10935..11279)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTK6_NATM8
Uncharacterized protein {ECO:0000313|EMBL:CQR51164.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_8_scaffold_396_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11408..11683
DNA (276bp) protein (92aa)
Transcription regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMA8_9EURY
Transcription regulator {ECO:0000313|EMBL:EMA46811.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_8_scaffold_396_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12002..12184
DNA (183bp) protein (61aa)
hypothetical protein id=24616364 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP87687.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_8_scaffold_396_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12346..13323
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW14_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26843.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_8_scaffold_396_14
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13450..15057
DNA (1608bp) protein (536aa)
RNA-binding protein AU-1 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MJJ0_HALMO
RNA-binding protein AU-1 {ECO:0000256|HAMAP-Rule:MF_01910}; AU-binding protein {ECO:0000256|HAMAP-Rule:MF_01910}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
aubA; RNA-binding protein AU-1
sw_8_scaffold_396_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15288..16544)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHY5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61404.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
major facilitator superfamily MFS_1
sw_8_scaffold_396_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16745..17344)
DNA (600bp) protein (200aa)
riboflavin synthase subunit alpha n=1 Tax=Halomicrobium katesii RepID=UPI00035F6BA6
riboflavin synthase subunit alpha
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ACV46687.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
sw_8_scaffold_396_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17649..17930
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUC0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26845.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_8_scaffold_396_18
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18022..19974)
DNA (1953bp) protein (651aa)
Asparagine synthase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JL93_9EURY
Putative asparagine synthetase [glutamine-hydrolyzing] {ECO:0000313|EMBL:CQR53155.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="H
asparagine synthase
sw_8_scaffold_396_19
unknown

Not on your lists

20601..21029
DNA (429bp) protein (143aa)

This feature has no annotations

sw_8_scaffold_396_20
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21120..22031)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RYJ1_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB59892.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_8_scaffold_396_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22122..23987)
DNA (1866bp) protein (622aa)
UvrD/REP helicase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN24_9EURY
UvrD/REP helicase {ECO:0000313|EMBL:EMA45855.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 53
UvrD/REP helicase
sw_8_scaffold_396_22
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24119..25132)
DNA (1014bp) protein (338aa)
glucokinase (EC:2.7.1.2)
Glucokinase {ECO:0000313|EMBL:ADQ68332.1}; EC=2.7.1.2 {ECO:0000313|EMBL:ADQ68332.1};; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" sour
Glucokinase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NL83_HALBP
sw_8_scaffold_396_23
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25244..25699)
DNA (456bp) protein (152aa)
UspA domain-containing protein n=2 Tax=Natrinema RepID=I7CJ11_NATSJ
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:ELY81046.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
sw_8_scaffold_396_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25933..26682
DNA (750bp) protein (250aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M3A9_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA39079.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sw_8_scaffold_396_25

Not on your lists

26893..27345
DNA (453bp) protein (151aa)
Putative membrane-bound metal-dependent hydrolase (DUF457) n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y7Q1_9ARCH
Putative membrane-bound metal-dependent hydrolase (DUF457) {ECO:0000313|EMBL:ESS10908.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_8_scaffold_396_26
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27421..28002)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU26_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92105.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_8_scaffold_396_27
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28044..28706)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NCR2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54460.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_8_scaffold_396_28
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28703..29305)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JA21_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14543.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_8_scaffold_396_29
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29592..30203
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QTZ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92071.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_8_scaffold_396_30
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30347..33337
DNA (2991bp) protein (997aa)
Excinuclease ABC subunit A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MND4_9EURY
Excinuclease ABC subunit A {ECO:0000313|EMBL:EMA46254.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
excinuclease ABC subunit A
Displaying items 1-30 of 31 in total

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