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sw_8_scaffold_432

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_432_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(221..448)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N744_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53378.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_8_scaffold_432_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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536..1219
DNA (684bp) protein (228aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSG7_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW92376.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
DNA binding domain-containing protein
sw_8_scaffold_432_3
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1455..2627)
DNA (1173bp) protein (391aa)
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:CCH52927.1}; EC=4.2.1.6 {ECO:0000313|EMBL:CCH52927.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyto
Mandelate racemase/muconate lactonizing protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GGA2_9BACT
Mandelate racemase
sw_8_scaffold_432_4
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2744..3403)
DNA (660bp) protein (220aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HNA0_9EURY
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000313|EMBL:CQR52530.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp.
dimethylmenaquinone methyltransferase
sw_8_scaffold_432_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3533..4318
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6J1_HALJB
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADJ13868.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalka
sw_8_scaffold_432_6

Not on your lists

comp(4363..5664)
DNA (1302bp) protein (434aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:AEN07014.1}; EC=5.4.3.8 {ECO:0000313|EMBL:AEN07014.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=halophilic archaeon DL31 RepID=G2MNN6_9ARCH
sw_8_scaffold_432_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5748..5993
DNA (246bp) protein (82aa)
mandelate racemase/muconate lactonizing protein id=24613559 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ESP90192.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" s
hypothetical protein
sw_8_scaffold_432_8
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6065..6283)
DNA (219bp) protein (73aa)
Transposase IS4 family protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XP75_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:ELY63347.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10
sw_8_scaffold_432_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6285..6752)
DNA (468bp) protein (156aa)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGS6_9EURY
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:EMA44932.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
protein-tyrosine-phosphatase
sw_8_scaffold_432_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6766..7929)
DNA (1164bp) protein (388aa)
Arsenical-resistance protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZZ9_9EURY
Arsenical-resistance protein {ECO:0000313|EMBL:EMA37705.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensi
arsenical-resistance protein
sw_8_scaffold_432_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7922..8320)
DNA (399bp) protein (133aa)
Transcriptional regulator, ArsR family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJM9_9EURY
Transcriptional regulator, ArsR family protein {ECO:0000313|EMBL:EMA44934.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
regulatory protein ArsR
sw_8_scaffold_432_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8706..8882
DNA (177bp) protein (59aa)
Endoribonuclease L-PSP n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFC6_9EURY
Endoribonuclease L-PSP {ECO:0000313|EMBL:EMA56677.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
putative translation initiation inhibitor, yjgF family protein
sw_8_scaffold_432_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9014..9973)
DNA (960bp) protein (320aa)
Permease n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NCB3_9EURY
Permease {ECO:0000313|EMBL:EMA55213.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
permease
sw_8_scaffold_432_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9975..10358)
DNA (384bp) protein (128aa)
ArsR family transcriptional regulator n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NDP7_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:EMA55214.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus th
putative transcriptional regulator
Displaying 14 items

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