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sw_8_scaffold_541

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_541_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..364
DNA (363bp) protein (121aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJZ6_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44780.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
putative DNA binding protein
sw_8_scaffold_541_2
unknown

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comp(459..1070)
DNA (612bp) protein (204aa)

This feature has no annotations

sw_8_scaffold_541_3
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1593..2528)
DNA (936bp) protein (312aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
lip; lipoyl synthase (EC:2.8.1.-)
Probable lipoyl synthase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MV42_HALMO
sw_8_scaffold_541_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2694..4112
DNA (1419bp) protein (473aa)
MATE efflux family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXG1_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EMA49993.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
putative efflux protein, MATE family
sw_8_scaffold_541_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4253..6607
DNA (2355bp) protein (785aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3S3_HALJB
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ADJ13414.1}; DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:ELY32754.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halob
DEAD/DEAH box helicase domain-containing protein
sw_8_scaffold_541_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6707..7324
DNA (618bp) protein (206aa)
Sodium/calcium exchanger membrane region n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M8N1_9EURY
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:EMA40964.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sodium:calcium antiporter
sw_8_scaffold_541_7
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7849..8514)
DNA (666bp) protein (222aa)
HAD-superfamily hydrolase id=24619741 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:ERH07154.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; H
haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED
sw_8_scaffold_541_8
unknown

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comp(8602..9078)
DNA (477bp) protein (159aa)

This feature has no annotations

sw_8_scaffold_541_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9124..10305
DNA (1182bp) protein (394aa)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=797114 species="Archaea;
tRNA-splicing endonuclease n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2U7_9EURY
tRNA intron endonuclease
sw_8_scaffold_541_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10310..10486)
DNA (177bp) protein (59aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=halophilic archaeon J07HX64 RepID=U1QY03_9EURY
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ERH10817.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
trans-aconitate 2-methyltransferase
Displaying 10 items

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