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sw_8_scaffold_552

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_552_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..406)
DNA (405bp) protein (135aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NKW8_HALBP
type i restriction-modification system methyltransferase subunit
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:ADQ67120.1}; Type i restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:ELY29668.1}; TaxID=46
sw_8_scaffold_552_2
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(470..997)
DNA (528bp) protein (176aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NKW8_HALBP
type i restriction-modification system methyltransferase subunit
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:ADQ67120.1}; Type i restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:ELY29668.1}; TaxID=46
sw_8_scaffold_552_3
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1256..2827
DNA (1572bp) protein (524aa)
AMP-dependent synthetase and ligase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WLQ0_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELY50405.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobiu
AMP-dependent synthetase and ligase
sw_8_scaffold_552_4
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3122..3271)
DNA (150bp) protein (50aa)
UPF0391 membrane protein HacjB3_14695 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J949_HALJB
hypothetical protein
UPF0391 membrane protein HacjB3_14695 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halal
sw_8_scaffold_552_5
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3461..4798)
DNA (1338bp) protein (446aa)
exoribonuclease II (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B044_9EURY
Ribonuclease R {ECO:0000313|EMBL:ELZ04160.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
sw_8_scaffold_552_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5170..5472)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF91_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43364.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_8_scaffold_552_7
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5561..6040
DNA (480bp) protein (160aa)
RNA-binding protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00036C888F
ArCOG04150 universal archaeal PUA-domain protein {ECO:0000313|EMBL:CDK41069.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Haloru
conserved protein with predicted RNA binding PUA domain
sw_8_scaffold_552_8
unknown

Not on your lists

comp(6180..6530)
DNA (351bp) protein (117aa)

This feature has no annotations

sw_8_scaffold_552_9
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6731..7915)
DNA (1185bp) protein (395aa)
Peptidase M29 aminopeptidase II n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PD39_9EURY
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:EMA68032.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM
pepB_3; aminopeptidase ( leucyl aminopeptidase, aminopeptidase T) 3
sw_8_scaffold_552_10
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8237..9391)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SJG4_9EURY
putative sorbitol dehydrogenase Tax=RBG_16_Bathyarchaeota_48_13_curated
alcohol dehydrogenase
sw_8_scaffold_552_11
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9493..10713
DNA (1221bp) protein (407aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CXT0_9RHIZ
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EDQ35717.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae;
hpsK; Dihydroxypropanesulfonate (DHPS) TRAP transporter
sw_8_scaffold_552_12
Grimontia hollisae, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10827..11378
DNA (552bp) protein (184aa)
TRAP dicarboxylate transporter DctQ subunit n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I9P9_GRIHO
TRAP dicarboxylate transporter DctQ subunit {ECO:0000313|EMBL:EEY71764.1}; TaxID=675812 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimonti
dctQ6; TRAP transporter small permease subunit DctQ
sw_8_scaffold_552_13
Grimontia hollisae, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11381..12661
DNA (1281bp) protein (427aa)
C4-dicarboxylate ABC transporter n=1 Tax=Enterovibrio calviensis RepID=UPI0002F3A6A1
TRAP-type C4-dicarboxylate transport system large permease component {ECO:0000313|EMBL:EEY71765.1}; TaxID=675812 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grim
putative TRAP-type C4-dicarboxylate transport system, large permease component DctM
sw_8_scaffold_552_14
unknown

Not on your lists

12766..13014
DNA (249bp) protein (83aa)

This feature has no annotations

sw_8_scaffold_552_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13219..13941)
DNA (723bp) protein (241aa)
2-haloalkanoic acid dehalogenase, type II n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZB9_9EURY
2-haloalkanoic acid dehalogenase, type II {ECO:0000313|EMBL:EMA37714.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
haloacid dehalogenase, type II
sw_8_scaffold_552_16
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14386..15648
DNA (1263bp) protein (421aa)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WLS1_9EURY
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ELY50425.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius
3-hydroxybutyryl-CoA dehydrogenase
sw_8_scaffold_552_17
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15593..16393
DNA (801bp) protein (267aa)
hydrolase ( hydroxyacylglutathione hydrolase ) 3 (EC:3.1.2.6)
Hydrolase ( hydroxyacylglutathione hydrolase ) 3 n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C1J8_9EURY
Hydrolase (Hydroxyacylglutathione hydrolase) 3 {ECO:0000313|EMBL:ELZ17070.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloter
sw_8_scaffold_552_18
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16455..17540)
DNA (1086bp) protein (362aa)
Putative mandelate racemase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B8A8_NATA1
Putative mandelate racemase {ECO:0000313|EMBL:ELZ05889.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC
putative mandelate racemase
sw_8_scaffold_552_19
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17791..18993
DNA (1203bp) protein (401aa)
Metal-dependent cyclase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0ALX0_NATA1
Metal-dependent cyclase {ECO:0000313|EMBL:ELY98912.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
metal-dependent cyclase
sw_8_scaffold_552_20
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18953..19204
DNA (252bp) protein (84aa)
Metal-dependent cyclase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0ALX0_NATA1
Metal-dependent cyclase {ECO:0000313|EMBL:ELY98912.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
secreted metal-dependent enzyme of cyclase family
sw_8_scaffold_552_21
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19603..20733
DNA (1131bp) protein (377aa)
Aldehyde Dehydrogenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEI4_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ELZ33880.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JC
aldehyde dehydrogenase
sw_8_scaffold_552_22

Not on your lists

comp(21106..21891)
DNA (786bp) protein (262aa)
ABC-type cobalt transport system, permease component CbiQ related transporter n=1 Tax=uncultured archaeon A07HR67 RepID=V4XLK5_9ARCH
ABC-type cobalt transport system, permease component CbiQ related transporter {ECO:0000313|EMBL:ESS02863.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR6
cobalt transport protein
sw_8_scaffold_552_23
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21888..23957)
DNA (2070bp) protein (690aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SLN5_9EURY
ABC transporter-like protein
sw_8_scaffold_552_24
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23985..24812)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TWV4_9EURY
QueT transporter {ECO:0000313|EMBL:ERG98145.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.;"
hypothetical protein
sw_8_scaffold_552_25
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24843..25460
DNA (618bp) protein (206aa)
Acetyltransferase n=1 Tax=halophilic archaeon J07HX64 RepID=U1NW25_9EURY
Acetyltransferase {ECO:0000313|EMBL:ERH08280.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
acetyltransferase, N-acetylglutamate synthase
Displaying 25 items

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