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sw_8_scaffold_572

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_572_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..841
DNA (840bp) protein (280aa)
Sec-independent periplasmic protein translocase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MWF5_HALMO
Sec-independent periplasmic protein translocase {ECO:0000313|EMBL:EMA48775.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
tatC; twin-arginine translocation protein TatC
sw_8_scaffold_572_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1030..1284
DNA (255bp) protein (85aa)
Putative CopG/Arc/MetJ family transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5Y7_HALJB
putative CopG/Arc/MetJ family transcriptional regulator
Putative CopG/Arc/MetJ family transcriptional regulator {ECO:0000313|EMBL:ELY34161.1}; Putative transcriptional regulator, CopG/Arc/MetJ family protein {ECO:0000313|EMBL:ADJ13793.1}; TaxID=795797 spec
sw_8_scaffold_572_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1277..1993
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZGE2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59745.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_8_scaffold_572_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2127..2960)
DNA (834bp) protein (278aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M844_9EURY
ribosomal RNA methyltransferase RrmJ/FtsJ
sw_8_scaffold_572_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3052..3762)
DNA (711bp) protein (237aa)
Predicted transcription regulator, containing DNA-binding HTH domain n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAL1_HALJB
putative transcriptional regulator, containing DNA-binding HTH domain
Predicted transcription regulator, containing DNA-binding HTH domain {ECO:0000313|EMBL:ADJ14733.1}; XRE family transcriptional regulator {ECO:0000313|EMBL:ELY39315.1}; TaxID=795797 species="Archaea; E
sw_8_scaffold_572_6
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3935..4960
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XG77_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY59683.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
sw_8_scaffold_572_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4957..5991
DNA (1035bp) protein (345aa)
Chloromuconate cycloisomerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKQ4_9EURY
Chloromuconate cycloisomerase {ECO:0000313|EMBL:EMA44995.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
enolase
sw_8_scaffold_572_8
unknown

Not on your lists

comp(6147..6635)
DNA (489bp) protein (163aa)

This feature has no annotations

sw_8_scaffold_572_9
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6889..7089)
DNA (201bp) protein (67aa)
argD; 4-aminobutyrate aminotransferase (EC:2.6.1.19)
4-aminobutyrate aminotransferase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HLV5_9EURY
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:ELZ96174.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis
sw_8_scaffold_572_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7086..8360)
DNA (1275bp) protein (425aa)
Magnesium transporter accessory protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTK3_9EURY
Magnesium transporter accessory protein {ECO:0000313|EMBL:EMA35729.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
magnesium transporter accessory protein
sw_8_scaffold_572_11
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8584..8856
DNA (273bp) protein (91aa)
Phosphoglycerate mutase {ECO:0000313|EMBL:AEM55768.1}; EC=5.4.2.- {ECO:0000313|EMBL:AEM55768.1};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarc
Phosphoglycerate mutase n=2 Tax=Haloarcula hispanica RepID=G0HQX7_HALHT
phosphoglycerate mutase
sw_8_scaffold_572_12
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8905..9195
DNA (291bp) protein (97aa)
Fructose-2,6-bisphosphatase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MT11_HALMO
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:EMA48761.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM
sw_8_scaffold_572_13
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9273..10268)
DNA (996bp) protein (332aa)
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH23_9EURY
tRNA methyltransferase
tRNA methyltransferase {ECO:0000313|EMBL:AHG00566.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;
sw_8_scaffold_572_14
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10873..12912
DNA (2040bp) protein (680aa)
DNA-binding protein MutS2 n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JFK5_NATP1
mismatch repair ATPase (MutS family)
DNA-binding protein MutS2 {ECO:0000256|HAMAP-Rule:MF_00971}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain
sw_8_scaffold_572_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13287..14111
DNA (825bp) protein (275aa)
ORC1-type DNA replication protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P7L8_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
orc complex protein cdc6/orc1
sw_8_scaffold_572_16
unknown

Not on your lists

comp(14040..14213)
DNA (174bp) protein (58aa)

This feature has no annotations

sw_8_scaffold_572_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14204..15406)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRP0_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36939.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_8_scaffold_572_18
unknown

Not on your lists

comp(15850..16224)
DNA (375bp) protein (125aa)

This feature has no annotations

sw_8_scaffold_572_19
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16755..17543)
DNA (789bp) protein (263aa)
Bacteriorhodopsin n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IDG5_9EURY
Bacteriorhodopsin {ECO:0000313|EMBL:ELZ94097.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;"
bacteriorhodopsin
sw_8_scaffold_572_20
unknown

Not on your lists

17896..18084
DNA (189bp) protein (63aa)

This feature has no annotations

sw_8_scaffold_572_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18777..19442)
DNA (666bp) protein (222aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QW86_9EURY
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:EFW91220.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Halada
DNA binding domain-containing protein
Displaying 21 items

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