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sw_8_scaffold_1676_20

Organism: SW_8_Halobacteriales_64_16

near complete RP 30 / 55 MC: 4 BSCG 27 / 51 MC: 2 ASCG 36 / 38 MC: 3
Location: 13394..14128

Top 3 Functional Annotations

Value Algorithm Source
RPGR (Fragment) n=1 Tax=Rattus norvegicus RepID=Q56PB7_RAT similarity UNIREF
DB: UNIREF100
  • Identity: 27.6
  • Coverage: 210.0
  • Bit_score: 69
  • Evalue 7.10e-09
RPGR {ECO:0000313|EMBL:AAX49610.1}; Flags: Fragment;; TaxID=10116 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sci similarity UNIPROT
DB: UniProtKB
  • Identity: 27.6
  • Coverage: 210.0
  • Bit_score: 69
  • Evalue 1.00e-08
spore wall protein 2-like similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 216.0
  • Bit_score: 63
  • Evalue 9.40e-08

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Taxonomy

Rattus norvegicus → Rattus → Rodentia → Mammalia → Chordata → Metazoa

Sequences

DNA sequence
Length: 735
ATGCCGGGCACTGAGACGGTTTCGCTCCCTCTCGACGAATCGGTAGTGAACGCACTCGACGAAGAGATCGGATCTCACGACCTCTCGCGCCCGGAGTACATCCGATATATCGTCGAAGTACGCCACGACCGAGCCGAACTCAAGCAGGACCTCGACCGAGCGACCGAGCGCGTCGAGGAACTCGAAGGGAAGCTCCGGCGCACGACGAACCGGAACGACGATCTCCGCCAGGAAAACGAGAGCCTGCGGCGTGAACGGAACGAACTACAGCGCGACCTCGAAAGAGCCGAGTCACGGGTCGAAGAACTCGGACGACGGCTCCGCGAGGCGACCGAACCGGGGGCCGAGGGCACGTCGGGACACGAGGGGAGCCGAACCGACGGCGAGGGCGGCGAGCGCGAAAGCGGCGACGAGGAAAACGGAGGTGCCCGACAGGACGACGGAGGCGACCGACGGGACGACGGGACGGCGAACGGGGTAGCTAGCGACGACGAAAGCGAAACGGGAGCGAGCAACCGAACCGGAGAGGAAAGCGAGAACCGCGACGTAACCGAGGAGGGAAGCGAGGCGACCGATAGTCGGACGACGAACTCGGCGAAATGTAACGCGGACGAACACGGGACGGACGAACACCGGACGGACGGCCGAGACGAGCGAGCATCGAACGAGACCGGAGAGCGGGACGGGGACGAACTGAAAGCGTGTGCGGCCCGACTCGAGACGTATCTCGGTTGA
PROTEIN sequence
Length: 245
MPGTETVSLPLDESVVNALDEEIGSHDLSRPEYIRYIVEVRHDRAELKQDLDRATERVEELEGKLRRTTNRNDDLRQENESLRRERNELQRDLERAESRVEELGRRLREATEPGAEGTSGHEGSRTDGEGGERESGDEENGGARQDDGGDRRDDGTANGVASDDESETGASNRTGEESENRDVTEEGSEATDSRTTNSAKCNADEHGTDEHRTDGRDERASNETGERDGDELKACAARLETYLG*