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sw_8_scaffold_1676

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1676_1
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3..2051)
DNA (2049bp) protein (683aa)
Subtilisin-like serine protease n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R1U4_HALMT
Subtilisin-like serine protease {ECO:0000313|EMBL:AFK18204.2}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (s
aprE; subtilisin-like serine protease
sw_8_scaffold_1676_2
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2213..2935)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IZ64_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01054.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
3-isopropylmalate dehydratase
sw_8_scaffold_1676_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2939..3121)
DNA (183bp) protein (61aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D3A1_HALXS
ribosome biogenesis protein Nop10
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis
sw_8_scaffold_1676_4
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3275..4075)
DNA (801bp) protein (267aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LBB4_HALJP
Translation initiation factor 2 subunit alpha {ECO:0000256|HAMAP-Rule:MF_00231}; aIF2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; eIF-2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; TaxID=1227453 species="Arc
eif2A; translation initiation factor IF-2 subunit alpha
sw_8_scaffold_1676_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4157..4354)
DNA (198bp) protein (66aa)
30S ribosomal protein S27e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQ44_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
30S ribosomal protein S27E
sw_8_scaffold_1676_6
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4356..4634)
DNA (279bp) protein (93aa)
50S ribosomal protein L44e n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3ADM3_9EURY
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1
ribosomal protein L44E
sw_8_scaffold_1676_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4816..5082
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J675_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15793.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_8_scaffold_1676_8
unknown

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5122..5268
DNA (147bp) protein (49aa)

This feature has no annotations

sw_8_scaffold_1676_9

Not on your lists

comp(5631..5834)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y9U4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11723.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_8_scaffold_1676_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5961..7070
DNA (1110bp) protein (370aa)
Small GTP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIK2_9EURY
Small GTP-binding protein {ECO:0000313|EMBL:EMA45193.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
drg; GTP-binding protein
sw_8_scaffold_1676_11
unknown

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7208..7321
DNA (114bp) protein (38aa)

This feature has no annotations

sw_8_scaffold_1676_12
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7318..7635
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M4G3_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA40303.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_8_scaffold_1676_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8485..8841
DNA (357bp) protein (119aa)
glo; lyase/dioxygenase ( lactoylglutathione lyase, aromatic compounds dioxygenase) (EC:4.4.1.5)
Lactoylglutathione lyase-like lyase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M3A4_HALMO
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EMA40302.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrh
sw_8_scaffold_1676_14
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8991..9752)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4II64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03087.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_8_scaffold_1676_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10315..10839
DNA (525bp) protein (175aa)
Formate/nitrite transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNN3_9EURY
Formate/nitrite transporter {ECO:0000313|EMBL:EMA46973.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
formate/nitrite transporter
sw_8_scaffold_1676_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11191..11850
DNA (660bp) protein (220aa)
Formate/nitrite transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNN3_9EURY
Formate/nitrite transporter {ECO:0000313|EMBL:EMA46973.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
formate/nitrite transporter
sw_8_scaffold_1676_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11801..11974
DNA (174bp) protein (58aa)
Formate/nitrite transporter {ECO:0000313|EMBL:ESP88004.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Ha
sw_8_scaffold_1676_18
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12013..12846)
DNA (834bp) protein (278aa)
rhodopsin; K04642 halorhodopsin id=24619426 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Bacteriorhodopsin {ECO:0000313|EMBL:ERH06841.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
hop; halorhodopsin
sw_8_scaffold_1676_19
unknown

Not on your lists

13027..13353
DNA (327bp) protein (109aa)

This feature has no annotations

sw_8_scaffold_1676_20
Rattus norvegicus, Rattus, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

13394..14128
DNA (735bp) protein (245aa)
RPGR (Fragment) n=1 Tax=Rattus norvegicus RepID=Q56PB7_RAT
RPGR {ECO:0000313|EMBL:AAX49610.1}; Flags: Fragment;; TaxID=10116 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sci
spore wall protein 2-like
sw_8_scaffold_1676_21
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14289..14645
DNA (357bp) protein (119aa)
Uncharacterized gene 48 protein n=2 Tax=Saimiriine herpesvirus 2 RepID=VG48_SHV21
Collagen domain protein
Collagen domain protein {ECO:0000313|EMBL:AAV95274.2}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (st
sw_8_scaffold_1676_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14924..15589
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N821_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54082.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_8_scaffold_1676_23

Not on your lists

15586..15963
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MHG6_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN06635.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Displaying 23 items

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