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sw_8_scaffold_344_19

Organism: SW_8_Halobacteriales_64_16

near complete RP 30 / 55 MC: 4 BSCG 27 / 51 MC: 2 ASCG 36 / 38 MC: 3
Location: comp(18366..18986)

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 205.0
  • Bit_score: 225
  • Evalue 9.20e-56
Probable tRNA pseudouridine synthase B n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PCF0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 205.0
  • Bit_score: 225
  • Evalue 6.60e-56
H/ACA RNA-protein complex component Cbf5p similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 205.0
  • Bit_score: 223
  • Evalue 7.00e-56

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Taxonomy

Halorubrum aidingense → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 621
ATGCGAGAGATCTACGGGCTGGAGGTACTCGACAGCGAGGCGCGCCGAGCACTCCTGCGGATCAGTTGTGAAAGCGGGACCTACGTGCGAAAGCTGTGTCACGACCTGGGGCTGGCGCTCGGGACCGGCGCGCACATGGGTGATCTGCGGCGAACGCGGGCACGGCCGTTCGACGACCGTGACCTCGTGACGCTTCACGATCTCGCCGACGCGCTCGCGTTCGCAACGGCGGGCGAGGTCGAGGCGCTTCGCGAGGTCGTGAAGCCGGCCGAACGAGCTCTGGTTCACCTGCCCCACCTCGTCGTCGCCGAGAGCGCCGCTCGCGAGGTGGCCAACGGCGCACCGGTGTACGCCCCTGGCGTGCTCGATTACGAGTCGCCCGAACGCACGCTCACAGGAGAAAAACCGGGTTCGGGCAGGCACGGCGGAGGCGGCCACGACGGGGACGGGAACCGAAACAAGGGAGGGAGCAACGACAGCACGAACGGCGGCAGGGACGACGAGACACCGCTCGTCACGTGCTGTACGCCGGACGGCGCGGCCGTTTGTCTGGGTCGGCTCGTCGGCGACCCGGAAGCGGAGCACGGGACGGTCGTCGATACCGAACGCGTGCTGGTATGA
PROTEIN sequence
Length: 207
MREIYGLEVLDSEARRALLRISCESGTYVRKLCHDLGLALGTGAHMGDLRRTRARPFDDRDLVTLHDLADALAFATAGEVEALREVVKPAERALVHLPHLVVAESAAREVANGAPVYAPGVLDYESPERTLTGEKPGSGRHGGGGHDGDGNRNKGGSNDSTNGGRDDETPLVTCCTPDGAAVCLGRLVGDPEAEHGTVVDTERVLV*