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sw_8_scaffold_344

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_344_1
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..474
DNA (474bp) protein (158aa)
ABC transporter ATP-binding protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPY3_9EURY
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHG01381.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola lar
sw_8_scaffold_344_2
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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495..1250
DNA (756bp) protein (252aa)
ABC-2 type transporter n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A4P3_9EURY
ABC-2 type transporter {ECO:0000313|EMBL:ELY92323.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989.
ABC-type polysaccharide/polyol phosphate export systems, permease component
sw_8_scaffold_344_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1529..4015)
DNA (2487bp) protein (829aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2R4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51818.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_8_scaffold_344_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4063..4371)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MV77_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49647.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_8_scaffold_344_5
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4495..5790
DNA (1296bp) protein (432aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Natronococcus occultus SP4 RepID=L0JYI7_9EURY
sw_8_scaffold_344_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5936..6541
DNA (606bp) protein (202aa)
Galactoside O-acetyltransferase 3 n=1 Tax=Halogranum salarium B-1 RepID=J3EZL9_9EURY
Galactoside O-acetyltransferase 3 {ECO:0000313|EMBL:EJN61082.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
transferase
sw_8_scaffold_344_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6615..7967)
DNA (1353bp) protein (451aa)
Potassium channel-like protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6CYU4_9EURY
potassium channel-like protein
Potassium channel-like protein {ECO:0000313|EMBL:CCQ32398.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamate
sw_8_scaffold_344_8
unknown

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comp(8508..8702)
DNA (195bp) protein (65aa)

This feature has no annotations

sw_8_scaffold_344_9
unknown

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8848..9057
DNA (210bp) protein (70aa)

This feature has no annotations

sw_8_scaffold_344_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9138..9407)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3C1_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15228.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_8_scaffold_344_11
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9541..10374)
DNA (834bp) protein (278aa)
Htr-like protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2E4Y7_9EURY
HTR-like protein
Htr-like protein {ECO:0000313|EMBL:ERJ07298.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
sw_8_scaffold_344_12
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10489..11490)
DNA (1002bp) protein (334aa)
Beta-ribofuranosylaminobenzene 5'-phosphate synthase family n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LQJ5_HALLT
beta-ribofuranosylaminobenzene 5'-phosphate synthase family
Beta-ribofuranosylaminobenzene 5'-phosphate synthase family {ECO:0000313|EMBL:ACM57616.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sour
sw_8_scaffold_344_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11616..12794)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6L9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53491.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_8_scaffold_344_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13048..14688
DNA (1641bp) protein (547aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=1227457 species="Archaea; Euryarchaeota
Dihydroxy-acid dehydratase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N3N9_9EURY
dihydroxy-acid dehydratase
sw_8_scaffold_344_15
Haloterrigena turkmenica, Haloterrigena, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14809..15201)
DNA (393bp) protein (131aa)
hypothetical protein
Uncharacterized protein; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 /; VKM B-1734) (Halococcus turkmenicus).;"
sw_8_scaffold_344_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15299..15976)
DNA (678bp) protein (226aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWW2_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW90765.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
DNA binding domain-containing protein
sw_8_scaffold_344_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16102..16773
DNA (672bp) protein (224aa)
hypothetical protein
hypothetical protein id=24649669 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10755.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_8_scaffold_344_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17336..18271
DNA (936bp) protein (312aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBL8_9EURY
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:EMA55261.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
mscS; mechanosensitive ion channel
sw_8_scaffold_344_19
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18366..18986)
DNA (621bp) protein (207aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PCF0_9EURY
H/ACA RNA-protein complex component Cbf5p
sw_8_scaffold_344_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19452..20027)
DNA (576bp) protein (192aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
cmk2; cytidylate kinase (EC:2.7.4.25)
Cytidylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9L0_9EURY
sw_8_scaffold_344_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20150..21100)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23468.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_8_scaffold_344_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21219..21869)
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCU3_9EURY
sw_8_scaffold_344_23
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22105..22557
DNA (453bp) protein (151aa)
Uroporphyrinogen decarboxylase {ECO:0000313|EMBL:AKH97205.1}; EC=4.1.1.37 {ECO:0000313|EMBL:AKH97205.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKR1_9EURY
Displaying 23 items

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