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sw_8_scaffold_3237_15

Organism: SW_8_Halobacteriales_64_16

near complete RP 30 / 55 MC: 4 BSCG 27 / 51 MC: 2 ASCG 36 / 38 MC: 3
Location: 8825..9895

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 367.0
  • Bit_score: 351
  • Evalue 1.10e-93
tRNA-splicing ligase RtcB n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGA9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 367.0
  • Bit_score: 351
  • Evalue 8.00e-94
conserved hypothetical protein (UPF0027) similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 367.0
  • Bit_score: 351
  • Evalue 2.30e-94

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Taxonomy

Halorhabdus tiamatea → Halorhabdus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1071
ATGTTCGAGATCGAGGGTAAGCACACGACTGCGACAGTGATGGGAGAACCGGACATGTTCGACGAACGTTTCGTCGAACAGGTTCAACAGATCGTAGATCATGAGGCGTTCCGAAACCCCGTGAAAGTGATGGCAGACGGACATCCGGGGTCCGGTGCCGTCATCGGCTTCACGATGGCGCTCGGCGAGCGCGTGGTTCCCAATACGGTCGGTGTCGACATCGGCTGTGGAGTCTCTTCAGCTAGTTTGGGAGTAGAAGAGTTGCCGATGGCGTACGAAGACGCCGACGAACGGGTCCGGGAAGCCGTCCCGTTCGGCCGCGCAGTACACGACTTCGAGGGCGCGATGCACGTCGGCAACGAATTCCCCTGGGAGGTCGTCAACGACCGGTTCGAGCGGTTCAACGCCGCCTACGCCGAGCGCTCGGATCGCGAGATCGACCTGGCCGAGCATACTCCCAATGGCGAGTACGATCTCGATTACTTCAAAGCGCTCTGTGAGAGGGTCGGCTACGATATCAATCGCGCCATCGCGTCGGCCGGCACGCTCGGGGGCGGCAACCACTTCGTCGAGATCGCCCGCTCGGAACGAGACGGCGACCTCCGACTCGTGCTCCACTCGGGGTCCCGGGGTCTCGGACTGACCGTCGCGAACTACTGGCAGGAGCGTGCCGTCGAGAACCGACGAGCCGAACGAGCACGCGAGGCGGTCGACGAACTCGTTTCGGCGGGCTATGGCCCTTATCTCGAATTCGACCCCGATGCCACTTCGGACGAGGACCTACTGTCGTGGCTCCAGGGCGGCAAAGGCCAGTCGTTCATGCGCAAGGAGAAGATCCGTACCGACTTCGAGGGCGAGGCGATCGACGAGACGTTCGCCCGGCTCAAGCGGGCGATTCCGGGCCGTGGCGGCGATAGCGGTAGCGGTGACGACGGGGCCGACGAGGAACTCGCGTATCTCGACGGATCGGAGGCGCATGGCTACTTCGTCGATATGCTCTTCTGTCAGCAGTACGCCGCGACGAACCGCCGGCGGATGGTCGAACTCGCTTGTGAGGCGCTCGGCCTCCCC
PROTEIN sequence
Length: 357
MFEIEGKHTTATVMGEPDMFDERFVEQVQQIVDHEAFRNPVKVMADGHPGSGAVIGFTMALGERVVPNTVGVDIGCGVSSASLGVEELPMAYEDADERVREAVPFGRAVHDFEGAMHVGNEFPWEVVNDRFERFNAAYAERSDREIDLAEHTPNGEYDLDYFKALCERVGYDINRAIASAGTLGGGNHFVEIARSERDGDLRLVLHSGSRGLGLTVANYWQERAVENRRAERAREAVDELVSAGYGPYLEFDPDATSDEDLLSWLQGGKGQSFMRKEKIRTDFEGEAIDETFARLKRAIPGRGGDSGSGDDGADEELAYLDGSEAHGYFVDMLFCQQYAATNRRRMVELACEALGLP