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sw_8_scaffold_3237

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_3237_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..605
DNA (603bp) protein (201aa)
Competence-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDA9_9EURY
Competence-like protein {ECO:0000313|EMBL:EMA55967.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_8_scaffold_3237_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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723..1976
DNA (1254bp) protein (418aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_01244}; Short=DHQ synthase {ECO:0000256|HAMAP-Rule:MF_01244};; EC=1.4.1.24 {ECO:0000256|HAMAP-Rule:MF_01244};; 3-dehydroquinate synthase II {ECO:00
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVQ7_9EURY
sw_8_scaffold_3237_3
unknown

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comp(2028..2420)
DNA (393bp) protein (131aa)

This feature has no annotations

sw_8_scaffold_3237_4
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2438..3313)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0IUS0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA00567.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 3596
sarcosine oxidase subunit beta
sw_8_scaffold_3237_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3494..4027)
DNA (534bp) protein (178aa)
Mut/nudix family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGM9_9EURY
Mut/nudix family protein {ECO:0000313|EMBL:EMA44892.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
nudix family protein
sw_8_scaffold_3237_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4072..4461)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DBB6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ32795.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_8_scaffold_3237_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4567..4989
DNA (423bp) protein (141aa)
Transcription regulator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSB2_9EURY
Transcription regulator {ECO:0000313|EMBL:EMA36452.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
transcription regulator
sw_8_scaffold_3237_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4998..5300
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSN1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36451.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_8_scaffold_3237_9
unknown

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comp(5450..5842)
DNA (393bp) protein (131aa)

This feature has no annotations

sw_8_scaffold_3237_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6115..7209
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1L1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51857.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_8_scaffold_3237_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7276..7740)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6L3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53193.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_8_scaffold_3237_12
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7797..8228
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M7M9_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA40380.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_8_scaffold_3237_13
unknown

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8336..8560
DNA (225bp) protein (75aa)

This feature has no annotations

sw_8_scaffold_3237_14
unknown

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8563..8844
DNA (282bp) protein (94aa)

This feature has no annotations

sw_8_scaffold_3237_15
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8825..9895
DNA (1071bp) protein (357aa)
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
tRNA-splicing ligase RtcB n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGA9_9EURY
conserved hypothetical protein (UPF0027)
Displaying 15 items

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