ggKbase home page

sw_8_scaffold_12001

Search features with annotation key words

Displaying 4 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_12001_1
unknown

Not on your lists

comp(2..85)
DNA (84bp) protein (28aa)

This feature has no annotations

sw_8_scaffold_12001_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(178..816)
DNA (639bp) protein (213aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMA
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL32_CHIPD
murQ; N-acetylmuramic acid 6-phosphate etherase
sw_8_scaffold_12001_3
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1404..2165
DNA (762bp) protein (254aa)
Carboxy-terminal processing protease CtpB {ECO:0000313|EMBL:EKB47500.1}; EC=3.4.21.102 {ECO:0000313|EMBL:EKB47500.1};; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cycloba
peptidase S41 n=1 Tax=Echinicola pacifica RepID=UPI000375CBEE
C-terminal processing peptidase
sw_8_scaffold_12001_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2165..3010
DNA (846bp) protein (282aa)
Carboxyl-terminal protease n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJM7_NIAKG
carboxyl-terminal protease
Carboxyl-terminal protease {ECO:0000313|EMBL:AEW00774.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source=
Displaying 4 items

View Taxonomy
NameRatio
Sphingobacteriales
50.00%
unknown
25.00%
Cytophagales
25.00%
Sphingobacteriales: 0.5Cytophagales: 0.25unknown: 0.25SphingobacterialesCytophagalesunknown