ggKbase | organisms

Consensus taxonomy: Bacteroidetes → Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: SW_8_UNK

Properties

Avg. coverage: 5.19 Longest contig: 7.87 Kbp Bin length: 1.19 Mbp GC content: 43.46 %

Contigs count: 620 Features count: 1552 rRNAs count: 0 tRNAs count: 7

Genome completeness

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1

Displaying items 301-350 of 620 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
sw_8_scaffold_26108 Species: Solitalea canadensis (50%)	2	1187 bp	43.22	4.80	51.56
sw_8_scaffold_12029 Species: GWF2_Bacteroidetes_38_335_curated (100%)	2	1339 bp	40.48	3.58	100.15
sw_8_scaffold_10187 Species: R_Bacteroidetes_44_7 (50%)	2	1495 bp	44.28	4.41	94.72
sw_8_scaffold_22233 Species: Draconibacterium orientale (50%)	2	1673 bp	46.92	5.14	91.99
sw_8_scaffold_8345 Species: Lacinutrix sp. 5H-3-7-4 (50%)	2	1710 bp	39.77	3.51	82.63
sw_8_scaffold_10421 Species: Haliscomenobacter hydrossis (50%)	2	1474 bp	42.67	4.75	46.61
sw_8_scaffold_33339 Species: Microscilla marina (50%)	2	1191 bp	46.77	4.79	64.99
sw_8_scaffold_13191 Species: Pedobacter glucosidilyticus (50%)	2	1257 bp	45.82	6.28	89.50
sw_8_scaffold_12962 Species: R_Fluviicola_43_260 (50%)	2	1270 bp	42.13	6.30	91.65
sw_8_scaffold_9505 Species: Odoribacter laneus CAG:561 (50%)	2	1566 bp	39.66	5.56	51.72
sw_8_scaffold_18840 Species: Robiginitalea biformata (50%)	2	1588 bp	47.98	5.73	102.77
sw_8_scaffold_18263 Species: Flavihumibacter sp. ZG627 (50%)	2	1002 bp	47.90	5.59	96.71
sw_8_scaffold_12504 Species: GWF2_Bacteroidetes_35_48_curated (50%)	2	1302 bp	43.47	5.38	90.32
sw_8_scaffold_15270 Species: Microscilla marina (50%)	2	1137 bp	48.46	4.93	62.53
sw_8_scaffold_20587 Species: Cesiribacter andamanensis (50%)	2	1477 bp	41.77	7.45	55.45
sw_8_scaffold_27263 Species: Flexibacter litoralis (50%)	2	1387 bp	43.69	3.82	71.59
sw_8_scaffold_18269 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)	2	1002 bp	45.11	5.39	93.41
sw_8_scaffold_21473 Species: RBG_13_Bacteroidetes_43_22_curated (50%)	2	1439 bp	41.49	4.31	101.11
sw_8_scaffold_9053 Species: Phaeodactylibacter xiamenensis (50%)	2	1623 bp	44.42	5.42	65.62
sw_8_scaffold_8825 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated (50%)	2	1649 bp	40.27	4.00	94.24
sw_8_scaffold_9978 Species: GWF2_Bacteroidetes_41_31_curated (50%)	2	1516 bp	40.83	4.75	84.89
sw_8_scaffold_13666 Species: Pontibacter korlensis (50%)	2	1227 bp	40.91	4.40	96.82
sw_8_scaffold_21499 Species: GWF2_Bacteroidetes_38_335_curated (50%)	2	1733 bp	44.37	5.25	91.58
sw_8_scaffold_4225 Species: Sporocytophaga myxococcoides (50%)	2	2651 bp	47.34	5.32	78.54
sw_8_scaffold_10901 Species: Leadbetterella byssophila (50%)	2	1431 bp	43.54	4.05	84.49
sw_8_scaffold_11131 Species: GWB2_Bacteroidetes_41_8_curated (50%)	2	1411 bp	44.79	4.11	95.89
sw_8_scaffold_10902 Species: Haliscomenobacter hydrossis (50%)	2	1431 bp	43.61	6.01	74.21
sw_8_scaffold_13438 Species: Owenweeksia hongkongensis (50%)	2	1242 bp	43.56	4.51	90.82
sw_8_scaffold_9290 Species: Cesiribacter andamanensis (50%)	2	2105 bp	47.55	4.70	101.47
sw_8_scaffold_15286 Species: Anditalea andensis (50%)	2	1136 bp	42.87	5.99	72.36
sw_8_scaffold_4917 Species: CG_Flavo_02 (50%)	2	2411 bp	44.79	4.56	78.76
sw_8_scaffold_24249 Species: Rhodothermus marinus (50%)	2	1372 bp	44.46	5.69	56.20
sw_8_scaffold_9527 Species: GWF2_Bacteroidetes_38_335_curated (50%)	2	2844 bp	39.42	5.34	66.67
sw_8_scaffold_10680 Species: Pedobacter glucosidilyticus (50%)	2	1451 bp	48.04	4.55	83.32
sw_8_scaffold_8376 Species: CG_Bacteroid_02 (50%)	2	2506 bp	41.94	5.11	100.08
sw_8_scaffold_8837 Species: Galbibacter marinus (50%)	2	1647 bp	42.14	6.25	88.16
sw_8_scaffold_18285 Species: Pontibacter sp. BAB1700 (50%)	2	1001 bp	42.86	4.40	32.67
sw_8_scaffold_8146 Species: GWD2_Bacteroidetes_33_33_curated (50%)	2	1737 bp	48.07	4.78	99.31
sw_8_scaffold_27356 Species: Solitalea canadensis (50%)	2	1330 bp	46.84	5.71	95.41
sw_8_scaffold_12989 Species: Bacteroides caccae (50%)	2	1269 bp	42.47	3.94	60.76
sw_8_scaffold_13449 Species: Chitinophaga pinensis (50%)	2	1241 bp	42.22	5.00	90.65
sw_8_scaffold_16905 Species: GWF2_Bacteroidetes_38_335_curated (50%)	2	1059 bp	45.61	5.76	100.00
sw_8_scaffold_10454 Species: Saprospira grandis (50%)	2	1470 bp	45.44	5.37	80.82
sw_8_scaffold_14371 Species: Draconibacterium orientale (50%)	2	1184 bp	47.64	5.24	99.58
sw_8_scaffold_9301 Species: Fluviicola taffensis (50%)	2	2454 bp	42.01	4.36	62.96
sw_8_scaffold_10916 Species: Flexibacter litoralis (50%)	2	2036 bp	45.58	4.96	22.84
sw_8_scaffold_10456 Species: Saprospira grandis (50%)	2	1470 bp	41.16	4.97	78.37
sw_8_scaffold_17369 Species: Fulvivirga imtechensis (50%)	2	1039 bp	46.78	4.62	92.69
sw_8_scaffold_11379 Species: Fibrella aestuarina (50%)	2	1391 bp	46.37	5.10	92.52
sw_8_scaffold_20672 Species: Chitinophaga pinensis (50%)	2	1483 bp	42.82	4.92	89.01

Displaying items 301-350 of 620 in total

SW_8_Bacteroidetes_43_5

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

SW_8_Bacteroidetes_43_5

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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