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SW_8_Bacteroidetes_43_5

In projects: SW_8

Consensus taxonomy: Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: SW_8_UNK

Properties

Avg. coverage: 5.19 Longest contig: 7.87 Kbp Bin length: 1.19 Mbp GC content: 43.46 %
Contigs count: 620 Features count: 1552 rRNAs count: 0 tRNAs count: 7

Genome completeness

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Displaying items 351-400 of 620 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_8_scaffold_8153
Species: Sporocytophaga myxococcoides (50%)
2 1737 bp 41.85 5.07 81.69
sw_8_scaffold_9305
Species: Pontibacter korlensis (50%)
2 1590 bp 47.48 3.96 81.89
sw_8_scaffold_22402
Species: Schleiferia thermophila (50%)
2 1364 bp 42.23 4.40 49.93
sw_8_scaffold_7232
Species: Flexibacter litoralis (50%)
2 1877 bp 43.95 5.33 57.17
sw_8_scaffold_25286
Species: GWF2_Bacteroidetes_35_48_curated (100%)
2 1533 bp 44.29 5.94 95.50
sw_8_scaffold_5393
Species: Pontibacter korlensis (50%)
2 2260 bp 46.55 6.06 94.12
sw_8_scaffold_9540
Species: GWE2_Bacteroidetes_29_8_curated (50%)
2 2326 bp 45.57 4.56 97.64
sw_8_scaffold_10232
Species: GWE2_Bacteroidetes_42_39_curated (50%)
2 1492 bp 41.69 3.69 87.27
sw_8_scaffold_18068
Species: Pedobacter heparinus (50%)
2 1010 bp 45.74 4.85 88.81
sw_8_scaffold_11848
Species: Mucilaginibacter paludis (50%)
2 1353 bp 39.84 4.95 83.37
sw_8_scaffold_15765
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated (50%)
2 1112 bp 48.65 6.83 78.51
sw_8_scaffold_6548
Species: R_Fluviicola_43_260 (50%)
2 1994 bp 43.88 5.92 97.04
sw_8_scaffold_7239
Species: Niastella koreensis (50%)
2 1876 bp 41.36 5.76 90.19
sw_8_scaffold_9312
Species: Flavihumibacter petaseus (50%)
2 1589 bp 44.37 5.66 84.20
sw_8_scaffold_26331
Species: Sphingobacterium sp. PM2-P1-29 (50%)
2 1509 bp 42.68 4.51 67.99
sw_8_scaffold_11159
Species: CG_Bacteroid_01 (50%)
2 1409 bp 44.85 5.96 64.73
sw_8_scaffold_13694
Species: GWF2_Bacteroidetes_38_335_curated (50%)
2 1226 bp 46.57 5.38 85.64
sw_8_scaffold_14385
Species: Phaeodactylibacter xiamenensis (50%)
2 1183 bp 45.73 4.40 86.98
sw_8_scaffold_10469
Species: Emticicia oligotrophica (50%)
2 2045 bp 43.37 5.04 56.33
sw_8_scaffold_3366
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 3916 bp 39.76 4.93 94.54
sw_8_scaffold_8167
Species: Solitalea canadensis (50%)
2 1735 bp 45.30 4.55 76.60
sw_8_scaffold_10241
Species: Flavihumibacter petaseus (50%)
2 1491 bp 42.59 4.29 83.10
sw_8_scaffold_5865
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 2142 bp 41.88 5.09 91.04
sw_8_scaffold_11396
Species: Haliscomenobacter hydrossis (50%)
2 1390 bp 45.04 5.97 63.24
sw_8_scaffold_16004
Species: Echinicola vietnamensis (50%)
2 1811 bp 42.90 5.02 61.79
sw_8_scaffold_24380
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated (50%)
2 1390 bp 40.72 5.90 68.20
sw_8_scaffold_38611
Species: Chitinophaga pinensis (50%)
2 1021 bp 43.39 4.70 79.04
sw_8_scaffold_24383
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 1313 bp 41.51 4.11 63.29
sw_8_scaffold_29710
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 1255 bp 47.81 5.66 92.51
sw_8_scaffold_12099
Species: Runella slithyformis (50%)
2 1334 bp 46.10 5.70 85.01
sw_8_scaffold_12790
Species: Pontibacter sp. BAB1700 (50%)
2 1282 bp 40.33 5.15 98.52
sw_8_scaffold_14865
Species: GWE2_Bacteroidetes_29_8_curated (50%)
2 2511 bp 41.34 5.30 69.18
sw_8_scaffold_11640
Species: Fulvivirga imtechensis (50%)
2 1368 bp 47.44 6.14 85.31
sw_8_scaffold_13253
Species: Runella slithyformis (50%)
2 1253 bp 41.90 6.38 43.81
sw_8_scaffold_14175
Species: Pedobacter sp. NL19 (50%)
2 1196 bp 39.46 2.84 78.26
sw_8_scaffold_9336
Species: RBG_13_Bacteroidetes_42_15_curated (50%)
2 2677 bp 39.75 5.42 83.49
sw_8_scaffold_13485
Species: Pedobacter glucosidilyticus (50%)
2 1769 bp 42.28 3.34 80.05
sw_8_scaffold_7032
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 1911 bp 42.86 5.23 95.45
sw_8_scaffold_11411
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 1389 bp 47.44 5.69 94.38
sw_8_scaffold_7495
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 3307 bp 43.97 6.44 98.25
sw_8_scaffold_8878
Species: unidentified eubacterium SCB49 (50%)
2 1641 bp 41.68 5.73 22.85
sw_8_scaffold_9107
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 1616 bp 41.21 4.27 80.75
sw_8_scaffold_16251
Species: GWF2_Bacteroidetes_43_11_curated (50%)
2 1090 bp 46.79 5.05 83.12
sw_8_scaffold_11415
Species: Dyadobacter fermentans (50%)
2 1389 bp 42.48 4.10 92.87
sw_8_scaffold_17868
Species: Pedobacter glucosidilyticus (50%)
2 1018 bp 44.99 4.22 100.49
sw_8_scaffold_19089
Species: RBG_13_Bacteroidetes_46_8_curated (50%)
2 1656 bp 45.29 4.35 31.88
sw_8_scaffold_16486
Species: Parabacteroides distasonis (50%)
2 1078 bp 48.33 5.94 86.55
sw_8_scaffold_16947
Species: Bacteroides sp. CAG:462 (50%)
2 1771 bp 43.65 5.08 85.71
sw_8_scaffold_8190
Species: Saprospira grandis (50%)
2 2669 bp 40.09 5.17 63.96
sw_8_scaffold_8191
Species: Marivirga tractuosa (50%)
2 1731 bp 45.75 4.85 89.77
Displaying items 351-400 of 620 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.