ggKbase home page

sw_9_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 36 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_106_1
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..345)
DNA (345bp) protein (115aa)
HIT family hydrolase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TY94_9EURY
HIT family hydrolase {ECO:0000313|EMBL:AHG04934.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hit1; histidine triad family protein
sw_9_scaffold_106_2
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

467..817
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JT69_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA10880.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_9_scaffold_106_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

871..1488
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3R4_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37166.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_9_scaffold_106_4
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1554..3485
DNA (1932bp) protein (644aa)
Kinetochore-Ndc80 complex, subunit Spc25 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1H8_HALTV
Kinetochore-Ndc80 complex, subunit Spc25
Kinetochore-Ndc80 complex, subunit Spc25 {ECO:0000313|EMBL:ADB63225.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
sw_9_scaffold_106_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3993..4751
DNA (759bp) protein (253aa)
ArcR family transcription regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZN0_9EURY
ArcR family transcription regulator {ECO:0000313|EMBL:ELZ28068.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
IclR family transcriptional regulator
sw_9_scaffold_106_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4796..5158
DNA (363bp) protein (121aa)
Luciferase family protein id=1924170 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
luciferase family protein
sw_9_scaffold_106_7
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5261..5788
DNA (528bp) protein (176aa)
Luciferase family protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JRV4_NATP1
putative F420-dependent oxidoreductase, MSMEG_2256 family
Luciferase family protein {ECO:0000313|EMBL:ELY71461.1}; Putative F420-dependent oxidoreductase, MSMEG_2256 family {ECO:0000313|EMBL:AGB33337.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobact
sw_9_scaffold_106_8
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6307..7473)
DNA (1167bp) protein (389aa)
Acetyl-CoA acetyltransferase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RZV1_HALTV
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ADB62648.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (
sw_9_scaffold_106_9
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7473..8618)
DNA (1146bp) protein (382aa)
Acetyl-CoA acetyltransferase-like protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RZV0_HALTV
acetyl-CoA acetyltransferase-like protein
Acetyl-CoA acetyltransferase-like protein {ECO:0000313|EMBL:ADB62647.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
sw_9_scaffold_106_10
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8764..9228
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RZU9_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB62646.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_9_scaffold_106_11
Metallosphaera sedula, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(9241..10017)
DNA (777bp) protein (259aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
3-hydroxypropionyl-coenzyme A dehydratase {ECO:0000303|PubMed:19429610}; Short=3-hydroxypropionyl-CoA dehydratase {ECO:0000303|PubMed:19429610};; EC=4.2.1.116;; TaxID=399549 species="Archaea; Crenarch
3-hydroxypropionyl-coenzyme A dehydratase n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=HPCD_METS5
sw_9_scaffold_106_12
unknown

Not on your lists

10105..10470
DNA (366bp) protein (122aa)

This feature has no annotations

sw_9_scaffold_106_13
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10611..11087
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYN1_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI61553.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola
sw_9_scaffold_106_14
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11125..12735)
DNA (1611bp) protein (537aa)
AMP-dependent synthetase and ligase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WRM4_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELY52052.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeot
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
sw_9_scaffold_106_15
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

12843..14507
DNA (1665bp) protein (555aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II {ECO:0000313|EMBL:AKG92037.1}; EC=6.2.1.- {ECO:0000313|EMBL:AKG92037.1};; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglob
Long-chain-fatty-acid--CoA ligase id=2937593 bin=GWA2_Elusi_like_61_42 species=Natronorubrum tibetense genus=Natronorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
AMP-dependent synthetase and ligase
sw_9_scaffold_106_16
unknown

Not on your lists

14640..14957
DNA (318bp) protein (106aa)

This feature has no annotations

sw_9_scaffold_106_17
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15255..15647)
DNA (393bp) protein (131aa)
Thioesterase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W298_9EURY
Thioesterase {ECO:0000313|EMBL:ELY42443.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens JCM 14089.;"
thioesterase
sw_9_scaffold_106_18
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15980..17251
DNA (1272bp) protein (424aa)
Extracellular ligand-binding receptor n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E5V8_9EURY
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ELZ43175.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum corien
sw_9_scaffold_106_19
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17255..18073
DNA (819bp) protein (273aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
ABC transporter ATP-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E5X9_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ43176.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense
sw_9_scaffold_106_20
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18102..18830
DNA (729bp) protein (243aa)
High-affinity branched-chain amino acid transport ATP-binding protein livG n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E8C2_9EURY
High-affinity branched-chain amino acid transport ATP-binding protein livG {ECO:0000313|EMBL:ELZ43177.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
ABC-type branched-chain amino acid transport systems, ATPase component
sw_9_scaffold_106_21
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18827..20842
DNA (2016bp) protein (672aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E833_9EURY
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ELZ43178.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense D
sw_9_scaffold_106_22
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20835..22202
DNA (1368bp) protein (456aa)
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein id=24641132 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERH13980.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
ABC transporter permease
sw_9_scaffold_106_23
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22288..22620
DNA (333bp) protein (111aa)
ABC transporter substrate-binding protein id=24641134 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ERH13981.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
ABC transporter permease
sw_9_scaffold_106_24
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22666..23328
DNA (663bp) protein (221aa)
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ERG88781.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein id=24655281 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
ABC transporter permease
sw_9_scaffold_106_25
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23435..23659
DNA (225bp) protein (75aa)
Monoamine oxidase regulatory protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J7K2_HALVA
Monoamine oxidase regulatory protein {ECO:0000313|EMBL:EMA05107.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vall
monoamine oxidase regulatory protein
sw_9_scaffold_106_26
unknown

Not on your lists

23703..24491
DNA (789bp) protein (263aa)

This feature has no annotations

sw_9_scaffold_106_27
unknown

Not on your lists

24430..24606
DNA (177bp) protein (59aa)

This feature has no annotations

sw_9_scaffold_106_28
unknown

Not on your lists

24844..25017
DNA (174bp) protein (58aa)

This feature has no annotations

sw_9_scaffold_106_29
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(25011..25634)
DNA (624bp) protein (208aa)
Luciferase family protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USC5_ROSS1
luciferase family protein
Luciferase family protein {ECO:0000313|EMBL:ABQ89528.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus s
sw_9_scaffold_106_30
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26133..26396
DNA (264bp) protein (88aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ELZ43194.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ELZ43194.1};; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E9V2_9EURY
3-ketoacyl-ACP reductase
Displaying items 1-30 of 36 in total

View Taxonomy