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sw_9_scaffold_1150

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_1150_1
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1..447)
DNA (447bp) protein (149aa)
MaoC domain protein dehydratase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RUM8_HALTV
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ADB61200.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenic
sw_9_scaffold_1150_2
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(581..1342)
DNA (762bp) protein (254aa)
ABC transporter n=1 Tax=Pandoraea sp. RB-44 RepID=V5ULR5_9BURK
branched-chain amino acid ABC transporter ATP-binding protein
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF98279.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;"
sw_9_scaffold_1150_3

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comp(1339..2409)
DNA (1071bp) protein (357aa)
Inner-membrane translocator n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RZX1_HALTV
Uncharacterized protein {ECO:0000313|EMBL:KKL14696.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
inner-membrane translocator
sw_9_scaffold_1150_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2414..3277)
DNA (864bp) protein (288aa)
Inner-membrane translocator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MUC1_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:EMA48035.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
abc07p1; branched-chain/neutral amino acids ABC transporter permease
sw_9_scaffold_1150_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4611..5897
DNA (1287bp) protein (429aa)
Extracellular ligand-binding receptor n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR09_9EURY
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EMA48036.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
branched-chain amino acid ABC transporter periplasmic protein
sw_9_scaffold_1150_6
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5900..6646
DNA (747bp) protein (249aa)
Branched chain amino acid ABC transporter ATP-binding protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MUG6_HALMO
Branched chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA48090.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
amino acid ABC transporter ATPase
sw_9_scaffold_1150_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6771..7247)
DNA (477bp) protein (159aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L4Z5_HALJP
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EMA27045.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
butanediol dehydrogenase
sw_9_scaffold_1150_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7453..7800)
DNA (348bp) protein (116aa)
bdhA; (R,R)-butanediol dehydrogenase (EC:1.1.1.4)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Halogranum salarium B-1 RepID=J3A477_9EURY
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EJN60228.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salari
sw_9_scaffold_1150_9
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7964..8437
DNA (474bp) protein (158aa)
Isovaleryl-CoA dehydrogenase n=1 Tax=Halobacterium sp. DL1 RepID=G4IBZ9_9EURY
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AHG04108.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_9_scaffold_1150_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8543..9208
DNA (666bp) protein (222aa)
Acyl-CoA dehydrogenase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6E1_HALJB
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ADJ15859.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali
sw_9_scaffold_1150_11
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9257..9901
DNA (645bp) protein (215aa)
Aminoglycoside phosphotransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPS7_HALMO
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EMA47641.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhua
aph; aminoglycoside phosphotransferase
sw_9_scaffold_1150_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9847..10251
DNA (405bp) protein (135aa)
Aminoglycoside phosphotransferase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9UMK5_HALBP
aminoglycoside phosphotransferase
Predicted aminoglycoside phosphotransferase {ECO:0000313|EMBL:ADQ69420.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeo
sw_9_scaffold_1150_13
unknown

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comp(10268..10543)
DNA (276bp) protein (92aa)

This feature has no annotations

sw_9_scaffold_1150_14

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comp(10489..10821)
DNA (333bp) protein (111aa)
Phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate--CoA ligase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ADC0_THEID
Marine sediment metagenome DNA, contig: S01H4_C02587 {ECO:0000313|EMBL:GAG64501.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
sw_9_scaffold_1150_15
unknown

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comp(10897..11091)
DNA (195bp) protein (65aa)

This feature has no annotations

sw_9_scaffold_1150_16
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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11719..12132
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WYW8_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EID81584.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 132
sw_9_scaffold_1150_17
Gordonia namibiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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12135..12392
DNA (258bp) protein (86aa)
Putative hydrolase n=1 Tax=Gordonia namibiensis NBRC 108229 RepID=K6W144_9ACTO
Putative hydrolase {ECO:0000313|EMBL:GAC02259.1}; TaxID=1208314 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia namibiensis NBRC 108229.;"
putative carboxylesterase protein
sw_9_scaffold_1150_18
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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12338..12985
DNA (648bp) protein (216aa)
Alpha/beta hydrolase n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WYW9_9NOCA
Alpha/beta hydrolase {ECO:0000313|EMBL:EID81585.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.
alpha/beta hydrolase fold protein
Displaying 18 items

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