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sw_9_scaffold_2645

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_2645_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..996)
DNA (996bp) protein (332aa)
Cell division control protein 48/AAA family ATPase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSW9_9EURY
Cell division control protein 48/AAA family ATPase {ECO:0000313|EMBL:ELZ24959.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
ATPase AAA
sw_9_scaffold_2645_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(993..1223)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQP3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24958.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_9_scaffold_2645_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1460..3274
DNA (1815bp) protein (605aa)
ATPase-like protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6CVQ5_9EURY
ATPase-like protein
ATPase-like protein {ECO:0000313|EMBL:CCQ34632.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
sw_9_scaffold_2645_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3308..3901)
DNA (594bp) protein (198aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK56_9EURY
sw_9_scaffold_2645_5

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comp(4234..4518)
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:ESS04859.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_9_scaffold_2645_6
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4596..5258
DNA (663bp) protein (221aa)
Putative DNA binding protein n=1 Tax=Halonotius sp. J07HN6 RepID=U1NV63_9EURY
Putative DNA binding protein {ECO:0000313|EMBL:ERH01259.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
Bacterio-opsin activator HTH domain protein
sw_9_scaffold_2645_7
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5387..5731)
DNA (345bp) protein (115aa)
Response regulator {ECO:0000313|EMBL:CDK37960.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CDK37960.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;"
Response regulator n=1 Tax=Halorubrum sp. AJ67 RepID=V6DQX0_9EURY
response regulator receiver protein
sw_9_scaffold_2645_8
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6171..6608)
DNA (438bp) protein (146aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000313|EMBL:ELZ11072.1};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID
Histidine--tRNA ligase n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BKT4_9EURY
Suspect SCG annotation. See neighboring gene [sw_9_scaffold_2645_9].
histidyl-tRNA synthetase
sw_9_scaffold_2645_9
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6706..7347)
DNA (642bp) protein (214aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=543526 species="Archaea; Eur
Histidine--tRNA ligase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CD37_9EURY
sw_9_scaffold_2645_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7464..7883
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000369FB1E
osmC; osmotically inducible protein C
Osmotically inducible protein C {ECO:0000313|EMBL:ABC45017.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
sw_9_scaffold_2645_11
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7914..8564)
DNA (651bp) protein (217aa)
Transcriptional regulator, MarR family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRZ1_HALUD
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACV13166.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus
sw_9_scaffold_2645_12
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8622..9023)
DNA (402bp) protein (134aa)
Uncharacterized protein (Fragment) n=1 Tax=Mustela putorius furo RepID=M3XT19_MUSPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT04969.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumon
Displaying 12 items

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