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sw_9_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_34_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(341..1522)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQA9_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ66671.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_9_scaffold_34_2
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1681..3183
DNA (1503bp) protein (501aa)
rmeM1; type I restriction-modification system DNA-methyltransferase RmeM (EC:2.1.1.-)
Type I restriction-modification system DNA-methyltransferase rmeM n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EGB9_9EURY
Type I restriction-modification system DNA-methyltransferase rmeM {ECO:0000313|EMBL:ELZ46098.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.
sw_9_scaffold_34_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3176..4528
DNA (1353bp) protein (451aa)
type I restriction-modification enzyme, S subunit; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] id=24615212 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Type I restriction-modification enzyme, S subunit {ECO:0000313|EMBL:ESP88376.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;"
Type I restriction-modification system specificity subunit S
sw_9_scaffold_34_4
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4521..5219
DNA (699bp) protein (233aa)
rmeR1; type I site-specific deoxyribonuclease subunit RmeR (EC:3.1.21.3)
Type I site-specific deoxyribonuclease subunit rmeR n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EE86_9EURY
Type I site-specific deoxyribonuclease subunit rmeR {ECO:0000313|EMBL:ELZ46096.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Hal
sw_9_scaffold_34_5
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5191..7461
DNA (2271bp) protein (757aa)
rmeR2; type I site-specific deoxyribonuclease subunit rmeR (EC:3.1.21.3)
Type I site-specific deoxyribonuclease subunit rmeR n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EE86_9EURY
Type I site-specific deoxyribonuclease subunit rmeR {ECO:0000313|EMBL:ELZ46096.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Hal
sw_9_scaffold_34_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7454..8176
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MES1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44252.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
DUF45 family protein
sw_9_scaffold_34_7
unknown

Not on your lists

comp(8387..8509)
DNA (123bp) protein (41aa)

This feature has no annotations

sw_9_scaffold_34_8
unknown

Not on your lists

8761..8964
DNA (204bp) protein (68aa)

This feature has no annotations

sw_9_scaffold_34_9
unknown

Not on your lists

comp(8984..9130)
DNA (147bp) protein (49aa)

This feature has no annotations

sw_9_scaffold_34_10
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9171..9965)
DNA (795bp) protein (265aa)
Orc1-type DNA replication protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GWF2_HALVD
orc11; Orc1-type DNA replication protein
Orc1-type DNA replication protein {ECO:0000313|EMBL:ADE02948.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (str
sw_9_scaffold_34_11
unknown

Not on your lists

comp(10057..10167)
DNA (111bp) protein (37aa)

This feature has no annotations

sw_9_scaffold_34_12
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10582..11610
DNA (1029bp) protein (343aa)
Orc1-type DNA replication protein n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HWS3_9EURY
Orc1-type DNA replication protein {ECO:0000313|EMBL:ELZ88152.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus
orc14; Orc1-type DNA replication protein
sw_9_scaffold_34_13
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11602..12009)
DNA (408bp) protein (136aa)
Calcium binding protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K1U9_9EURY
Calcium binding protein {ECO:0000313|EMBL:EMA15186.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
calcium binding
sw_9_scaffold_34_14
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12043..12195)
DNA (153bp) protein (51aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH00198.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.;
sw_9_scaffold_34_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12269..12763)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D1Y0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28697.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_9_scaffold_34_16
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12756..13418)
DNA (663bp) protein (221aa)
DNA polymerase beta domain-containing protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AQB7_9EURY
DNA polymerase III subunit beta
DNA polymerase III subunit beta {ECO:0000313|EMBL:AHG01528.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larseni
sw_9_scaffold_34_17
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13476..14717)
DNA (1242bp) protein (414aa)
Integrase family protein n=2 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GWE4_HALVD
XerC/D-like integrase
Integrase family protein {ECO:0000313|EMBL:ADE04239.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC
sw_9_scaffold_34_18
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15028..15963)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KVV6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA25386.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
sw_9_scaffold_34_19
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15967..17823)
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LFZ7_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA30925.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_9_scaffold_34_20
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17882..19873)
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GWE1_HALVD
putative ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:ADE04853.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
sw_9_scaffold_34_21
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20022..20978
DNA (957bp) protein (319aa)
Putative endonuclease n=1 Tax=planctomycete KSU-1 RepID=I3ILG8_9PLAN
Putative endonuclease {ECO:0000313|EMBL:GAB62563.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
sw_9_scaffold_34_22
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20981..22645)
DNA (1665bp) protein (555aa)
N-6 DNA methylase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZT1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ETX04504.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
sw_9_scaffold_34_23
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22830..23084
DNA (255bp) protein (85aa)
Transcriptional regulator n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JR05_HALVA
Transcriptional regulator {ECO:0000313|EMBL:EMA11552.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis AT
transcriptional regulator
sw_9_scaffold_34_24
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23085..24809)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=2 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GWD9_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE02556.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
sw_9_scaffold_34_25
unknown

Not on your lists

comp(24931..25161)
DNA (231bp) protein (77aa)

This feature has no annotations

sw_9_scaffold_34_26
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25328..25708)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K5V0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA15200.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_9_scaffold_34_27
unknown

Not on your lists

comp(26099..26302)
DNA (204bp) protein (68aa)

This feature has no annotations

sw_9_scaffold_34_28
unknown

Not on your lists

26303..26812
DNA (510bp) protein (170aa)

This feature has no annotations

sw_9_scaffold_34_29
unknown

Not on your lists

27028..27582
DNA (555bp) protein (185aa)

This feature has no annotations

sw_9_scaffold_34_30
unknown

Not on your lists

comp(27571..27945)
DNA (375bp) protein (125aa)

This feature has no annotations

Displaying items 1-30 of 79 in total

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