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sw_9_scaffold_3474

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_3474_1
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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210..344
DNA (135bp) protein (45aa)
hypothetical protein id=24653426 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG87895.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_9_scaffold_3474_2
unknown

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comp(303..446)
DNA (144bp) protein (48aa)

This feature has no annotations

sw_9_scaffold_3474_3
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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619..1686
DNA (1068bp) protein (356aa)
ATP-binding region ATPase domain protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z7X7_9EURY
ATP-binding region ATPase domain protein {ECO:0000313|EMBL:ELY82454.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidu
integral membrane sensor signal transduction histidine kinase
sw_9_scaffold_3474_4
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1918..2481
DNA (564bp) protein (188aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IAB0_HALRX
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGB15758.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialba
sw_9_scaffold_3474_5
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2697..3095
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:CDK38536.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
sw_9_scaffold_3474_6
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3082..3327
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AW17_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ01579.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
hth domain-containing protein
sw_9_scaffold_3474_7
unknown

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comp(3688..4611)
DNA (924bp) protein (308aa)

This feature has no annotations

sw_9_scaffold_3474_8
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4738..5004)
DNA (267bp) protein (89aa)
Phytoene dehydrogenase n=2 Tax=Halobacterium salinarum RepID=Q9HSE1_HALSA
crtI3; phytoene dehydrogenase
Probable flavin containing oxidoreductase (Homolog to phytoene desaturase / monoamine oxidase) {ECO:0000313|EMBL:CAP13120.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
sw_9_scaffold_3474_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5501..6070
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P307_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47479.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_9_scaffold_3474_10
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6184..6459
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0GU83_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR53141.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_9_scaffold_3474_11
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6456..6887
DNA (432bp) protein (144aa)
PIN domain protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HZ65_9EURY
PIN domain protein {ECO:0000313|EMBL:ELZ89008.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
PIN domain
sw_9_scaffold_3474_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7005..7622)
DNA (618bp) protein (206aa)
Zinc transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWD2_9EURY
Zinc transporter {ECO:0000313|EMBL:ELZ26958.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
conserved hypothetical membrane protein, putative zinc transporter
sw_9_scaffold_3474_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7808..7981)
DNA (174bp) protein (58aa)
Short chain dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDZ0_9EURY
Short chain dehydrogenase {ECO:0000313|EMBL:EMA43972.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
sw_9_scaffold_3474_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8023..8871)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR23_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24334.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_9_scaffold_3474_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8901..9923
DNA (1023bp) protein (341aa)
Cytochrome oxidase subunit I-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7P1_9EURY
Cytochrome oxidase subunit I-like protein {ECO:0000313|EMBL:EMA52690.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
cyo; cytochrome oxidase subunit I-like
sw_9_scaffold_3474_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10046..10561)
DNA (516bp) protein (172aa)
Diphthine synthase {ECO:0000256|HAMAP-Rule:MF_01084}; EC=2.1.1.98 {ECO:0000256|HAMAP-Rule:MF_01084};; Diphthamide biosynthesis methyltransferase {ECO:0000256|HAMAP-Rule:MF_01084}; TaxID=797114 species
diphthine synthase (EC:2.1.1.98)
Diphthine synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGG1_9EURY
sw_9_scaffold_3474_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10858..11907
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGD4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22340.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
methyltransferase
sw_9_scaffold_3474_trna_1
unknown

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11934..12008
DNA (75bp)
transferRNA
sw_9_scaffold_3474_18
unknown

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comp(12068..12214)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 19 items

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