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sw_9_scaffold_350

Search features with annotation key words

Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_350_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..206
DNA (204bp) protein (68aa)
Integrase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NE90_9EURY
Integrase {ECO:0000313|EMBL:EMA56161.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
transposase
sw_9_scaffold_350_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(348..968)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MCH8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42095.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_9_scaffold_350_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1037..1972)
DNA (936bp) protein (312aa)
Cobalt ABC transporter ATP-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NGZ1_9EURY
Cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA55925.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
cbiO; ABC-type transport system ATP-binding protein (probable substrate cobalt/nickel/biotin)
sw_9_scaffold_350_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1969..2364)
DNA (396bp) protein (132aa)
Cobalt ABC transporter permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDJ5_9EURY
Cobalt ABC transporter permease {ECO:0000313|EMBL:EMA55926.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
cbiQ2; ABC-type transport system permease protein (probable substrate cobalt/nickel/biotin)
sw_9_scaffold_350_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2739..3080)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND65_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55927.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
ABC-type transport system small membrane protein (probable substrate cobalt/nickel/biotin)
sw_9_scaffold_350_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3080..3760)
DNA (681bp) protein (227aa)
Cobalt ABC transporter permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEE4_9EURY
Cobalt ABC transporter permease {ECO:0000313|EMBL:EMA55928.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
cbiM; ABC-type transport system permease protein (probable substrate cobalt/nickel/biotin)
sw_9_scaffold_350_7
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4022..4174
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JW79_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB36339.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_9_scaffold_350_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4268..4690)
DNA (423bp) protein (141aa)
Putative nickel-responsive regulator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSS3_9EURY
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
transcriptional regulator
sw_9_scaffold_350_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5007..5441)
DNA (435bp) protein (145aa)
CopG family transcripitonal regulator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEF5_9EURY
CopG family transcripitonal regulator {ECO:0000313|EMBL:EMA55938.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
CopG family transcriptional regulator
sw_9_scaffold_350_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5466..6314)
DNA (849bp) protein (283aa)
Putative sulfonate ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFL8_9EURY
Putative sulfonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA44168.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
ssuB; putative sulfonate ABC transporter ATP-binding protein
sw_9_scaffold_350_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6302..7150)
DNA (849bp) protein (283aa)
Sulfonate ABC transporter permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEH8_9EURY
Sulfonate ABC transporter permease {ECO:0000313|EMBL:EMA44167.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
ssuC; ABC-type transport system permease protein (probable substrate nitrate/sulfonate/bicarbonate)
sw_9_scaffold_350_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7147..8217)
DNA (1071bp) protein (357aa)
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDL4_9EURY
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein {ECO:0000313|EMBL:EMA55941.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococ
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
sw_9_scaffold_350_13
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8356..8763)
DNA (408bp) protein (136aa)
Putative nickel-responsive regulator n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P552_9EURY
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum koc
transcriptional regulator, CopG family
sw_9_scaffold_350_14
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9114..9320)
DNA (207bp) protein (69aa)
hypothetical protein id=24641042 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Uncharacterized protein {ECO:0000313|EMBL:ERH13901.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
sw_9_scaffold_350_15
unknown

Not on your lists

comp(9320..9499)
DNA (180bp) protein (60aa)

This feature has no annotations

sw_9_scaffold_350_16
unknown

Not on your lists

9502..9795
DNA (294bp) protein (98aa)

This feature has no annotations

sw_9_scaffold_350_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10034..11086)
DNA (1053bp) protein (351aa)
Integrase family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJB8_9EURY
Integrase family protein {ECO:0000313|EMBL:EMA44829.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
site-specific recombinase xerd
sw_9_scaffold_350_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11076..11474)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK50_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44830.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_350_19
unknown

Not on your lists

comp(12255..12848)
DNA (594bp) protein (198aa)

This feature has no annotations

sw_9_scaffold_350_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12853..13167)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6U2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53642.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
Displaying 20 items

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