ggKbase home page

sw_9_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 34 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_42_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1216..2328
DNA (1113bp) protein (371aa)
signal peptide protein n=1 Tax=Salisaeta longa RepID=UPI0003B6625A
FHA domain containing protein {ECO:0000313|EMBL:EDY18275.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
sw_9_scaffold_42_2
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2416..4728
DNA (2313bp) protein (771aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5FF52
protein kinase domain-containing protein Tax=RBG_16_Ignavibacteria_34_14_curated
protein kinase domain-containing protein
sw_9_scaffold_42_3
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5018..6112
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B41B4D
hypothetical protein Tax=RBG_16_Ignavibacteria_34_14_curated
hypothetical protein
sw_9_scaffold_42_4
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6483..7781
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B53678
hypothetical protein Tax=RBG_16_Ignavibacteria_34_14_curated
putative integral membrane protein
sw_9_scaffold_42_5
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7883..8995
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B34BFB
Tax=RBG_16_Ignavibacteria_34_14_curated
sw_9_scaffold_42_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9348..10001
DNA (654bp) protein (218aa)
cytochrome C n=1 Tax=Salisaeta longa RepID=UPI0003B4CD1E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25247.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_42_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10020..13574
DNA (3555bp) protein (1185aa)
Molybdopterin oxidoreductase, iron-sulfur binding subunit n=2 Tax=Salinibacter ruber RepID=D5HB41_SALRM
Molybdopterin oxidoreductase, iron-sulfur binding subunit {ECO:0000313|EMBL:CBH25246.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
molybdopterin oxidoreductase, iron-sulfur binding subunit
sw_9_scaffold_42_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13624..15129
DNA (1506bp) protein (502aa)
molybdopterin oxidoreductase, membrane subunit; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] id=24658042 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Probable molybdopterin oxidoreductase, membrane subunit {ECO:0000313|EMBL:CBH25245.1}; EC=1.2.7.- {ECO:0000313|EMBL:CBH25245.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II.
molybdopterin oxidoreductase, membrane subunit
sw_9_scaffold_42_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15181..15786
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HB39_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45987.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_42_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15870..16517
DNA (648bp) protein (216aa)
quinol:cytochrome C oxidoreductase n=1 Tax=Salisaeta longa RepID=UPI0003B6FAA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45944.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_42_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16596..17858
DNA (1263bp) protein (421aa)
molybdopterin oxidoreductase, membrane subunit
molybdopterin oxidoreductase, membrane subunit id=24658039 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Probable molybdopterin oxidoreductase, membrane subunit {ECO:0000313|EMBL:CBH25242.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
sw_9_scaffold_42_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17935..18726
DNA (792bp) protein (264aa)
hypothetical protein
hypothetical protein id=24658038 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25241.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_42_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18756..19622
DNA (867bp) protein (289aa)
electron transporter SenC n=1 Tax=Salisaeta longa RepID=UPI0003B73457
electron transport protein SCO1/SenC
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:ACY47134.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodother
sw_9_scaffold_42_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19662..20648
DNA (987bp) protein (329aa)
ctaC; cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] id=24658037 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain
ctaC; cytochrome c oxidase subunit II
sw_9_scaffold_42_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20716..22452
DNA (1737bp) protein (579aa)
Cytochrome oxidase subunit I {ECO:0000313|EMBL:ABC44742.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ABC44742.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
Cytochrome c oxidase subunit I n=2 Tax=Salinibacter ruber RepID=D5HB34_SALRM
ctaD; cytochrome c oxidase subunit I
sw_9_scaffold_42_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22530..23234
DNA (705bp) protein (235aa)
ctaE; cytochrome c oxidase subunit 3; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] id=24658035 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cytochrome c oxidase subunit 3 {ECO:0000313|EMBL:CBH25238.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CBH25238.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
ctaE; cytochrome c oxidase subunit 3
sw_9_scaffold_42_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23295..23720
DNA (426bp) protein (142aa)
ctaF; cytochrome oxidase subunit IV; K02277 cytochrome c oxidase subunit IV [EC:1.9.3.1] id=24658034 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ctaF; cytochrome oxidase subunit IV
Putative cytochrome oxidase subunit IV {ECO:0000313|EMBL:CBH25237.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_9_scaffold_42_18
unknown

Not on your lists

23829..23924
DNA (96bp) protein (32aa)

This feature has no annotations

sw_9_scaffold_42_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24411..24713
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B64649
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25236.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_42_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24736..25329)
DNA (594bp) protein (198aa)
hypothetical protein
hypothetical protein id=24658032 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25235.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_42_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25421..26380
DNA (960bp) protein (320aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
Methylenetetrahydrofolate reductase n=2 Tax=Salinibacter ruber RepID=D5HB29_SALRM
metF; 5,10-methylenetetrahydrofolate reductase
sw_9_scaffold_42_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26673..26993)
DNA (321bp) protein (107aa)
yfiA; ribosomal subunit interface protein
yfiA; ribosomal subunit interface protein id=24658030 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosomal subunit interface protein {ECO:0000313|EMBL:CBH25233.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_9_scaffold_42_23
unknown

Not on your lists

27122..27379
DNA (258bp) protein (86aa)

This feature has no annotations

sw_9_scaffold_42_24
BJP_IG2102_Cloacimonetes_48_20, Cloacimonetes, Bacteria

Not on your lists

27541..28116
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4F1_SALRM
hypothetical protein
Tax=BJP_IG2102_Cloacimonetes_48_20
sw_9_scaffold_42_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28157..28813)
DNA (657bp) protein (219aa)
ideR; Iron dependent repressor
ideR; Iron dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator id=24657978 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Iron dependent repressor {ECO:0000313|EMBL:CBH25181.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_9_scaffold_42_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


29126..31834
DNA (2709bp) protein (903aa)
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=24657977 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; valyl-tRNA synthetase
sw_9_scaffold_42_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32037..33245)
DNA (1209bp) protein (403aa)
Molybdopterin biosynthesis protein moeB n=2 Tax=Salinibacter ruber RepID=D5HAX3_SALRM
moeB; Molybdopterin biosynthesis protein moeB
MoeZ/MoeB domain family {ECO:0000313|EMBL:ABC44815.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_9_scaffold_42_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33403..33696)
DNA (294bp) protein (98aa)
ThiS family protein
thiS; ThiamineS id=24657972 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ThiamineS {ECO:0000313|EMBL:CBH25177.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).
sw_9_scaffold_42_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33826..34263)
DNA (438bp) protein (146aa)
Mov34/MPN/PAD-1 family n=2 Tax=Salinibacter ruber RepID=D5HAX1_SALRM
Mov34/MPN/PAD-1 family protein
Mov34/MPN/PAD-1 family {ECO:0000313|EMBL:CBH25176.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_9_scaffold_42_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(34401..35357)
DNA (957bp) protein (319aa)
Cysteine synthase A n=2 Tax=Salinibacter ruber RepID=D5HAX0_SALRM
cysK; cysteine synthase A
Cysteine synthase B {ECO:0000313|EMBL:ABC45260.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
Displaying items 1-30 of 34 in total

View Taxonomy