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sw_9_scaffold_457

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_457_1
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..456
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MXT0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG88945.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
phosphate ABC transporter permease
sw_9_scaffold_457_2

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comp(654..1388)
DNA (735bp) protein (245aa)
Zn-dependent hydrolase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XYN3_9ARCH
Zn-dependent hydrolase {ECO:0000313|EMBL:ESS07433.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
beta-lactamase domain-containing protein
sw_9_scaffold_457_3

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1461..2282
DNA (822bp) protein (274aa)
Putative deacylase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y8M0_9ARCH
Putative deacylase {ECO:0000313|EMBL:ESS07432.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
succinylglutamate desuccinylase / aspartoacylase family protein
sw_9_scaffold_457_4
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2344..2748)
DNA (405bp) protein (135aa)
Uncharacterized protein n=5 Tax=Halorubrum RepID=M0DFQ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ54244.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 1011
hypothetical protein
sw_9_scaffold_457_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2864..4405
DNA (1542bp) protein (514aa)
Carbohydrate kinase, FGGY family n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6D2E9_9EURY
carbohydrate kinase, FGGY family
Carbohydrate kinase, FGGY family {ECO:0000313|EMBL:CCQ33180.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiama
sw_9_scaffold_457_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4574..4735)
DNA (162bp) protein (54aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA38664.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_9_scaffold_457_7
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4735..5355)
DNA (621bp) protein (207aa)
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase n=1 Tax=Natronococcus occultus SP4 RepID=L0JWD8_9EURY
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase {ECO:0000313|EMBL:AGB37091.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" sou
fuca; L-fuculose phosphate aldolase
sw_9_scaffold_457_8
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5486..6964)
DNA (1479bp) protein (493aa)
Rhamnulokinase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L3Q1_HALJP
rhamnulokinase
Rhamnulokinase {ECO:0000313|EMBL:AJF27545.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_9_scaffold_457_9
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7039..7545)
DNA (507bp) protein (169aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYQ2_9EURY
Short-chain dehydrogenase {ECO:0000313|EMBL:KDE58134.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
short-chain dehydrogenase
sw_9_scaffold_457_10
unknown

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comp(7839..8174)
DNA (336bp) protein (112aa)

This feature has no annotations

sw_9_scaffold_457_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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8730..10355
DNA (1626bp) protein (542aa)
putative extracellular solute-binding protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625729
Uncharacterized protein {ECO:0000313|EMBL:ETX09130.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
putative extracellular solute-binding protein
sw_9_scaffold_457_12
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

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10431..11363
DNA (933bp) protein (311aa)
binding-protein-dependent transport systems inner membrane component n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625725
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein Tax=Caldatribacterium californiense
ABC transporter permease
sw_9_scaffold_457_13
bacterium UASB270, Bacteria

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11365..12207
DNA (843bp) protein (281aa)
binding-protein-dependent transport systems inner membrane component n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625726
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:GAK57382.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
sugar ABC transporter permease
sw_9_scaffold_457_14
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12209..13303
DNA (1095bp) protein (365aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00035CD952
ABC transporter {ECO:0000313|EMBL:ELZ53678.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 10118.;"
sugar ABC transporter ATP-binding protein
sw_9_scaffold_457_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13306..14313)
DNA (1008bp) protein (336aa)
Ketol-acid reductoisomerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8T8_9EURY
Ketol-acid reductoisomerase {ECO:0000313|EMBL:EMA54301.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
ketol-acid reductoisomerase
sw_9_scaffold_457_16
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14486..15253
DNA (768bp) protein (256aa)
Transcription regulator n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L3N3_9EURY
Transcription regulator {ECO:0000313|EMBL:EMA26605.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
arcR-6; transcription regulator
sw_9_scaffold_457_17
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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15559..15996
DNA (438bp) protein (146aa)
Transposase (ISHnew96) n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M8Z2_9EURY
Transposase (ISHnew96) {ECO:0000313|EMBL:EMA42262.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 1
transposase
sw_9_scaffold_457_18
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16109..16372)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LM68_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA34596.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
sw_9_scaffold_457_19
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16455..16898
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AYK4_NATA1
Uncharacterized protein {ECO:0000313|EMBL:KDE59085.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_9_scaffold_457_20
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16936..17367
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8N1_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH36783.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_9_scaffold_457_21
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(17369..18013)
DNA (645bp) protein (215aa)
Inosine-uridine nucleoside N-ribohydrolase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HBJ7_9EURY
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:ESP87418.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source
Inosine-uridine nucleoside N-ribohydrolase
Displaying 21 items

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