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sw_9_scaffold_458

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_458_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..156)
DNA (156bp) protein (52aa)
hypothetical protein id=24648935 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10069.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_9_scaffold_458_2
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

647..841
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DSA7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK39069.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
sw_9_scaffold_458_3
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1549..1674)
DNA (126bp) protein (42aa)
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:ELY69106.1}; Protein-tyrosine-phosphatase {ECO:0000313|EMBL:AGB33919.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarch
sw_9_scaffold_458_4
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1690..2076)
DNA (387bp) protein (129aa)
Arsenical-resistance protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C363_9EURY
Arsenical-resistance protein {ECO:0000313|EMBL:ELZ17635.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JC
arsenical-resistance protein
sw_9_scaffold_458_5
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2082..2723)
DNA (642bp) protein (214aa)
Arsenical-resistance protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YRW6_9EURY
Arsenical-resistance protein {ECO:0000313|EMBL:ELY76212.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;
arsenical-resistance protein
sw_9_scaffold_458_6
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2782..3180)
DNA (399bp) protein (133aa)
Transcriptional regulator, ArsR family protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0AC28_9EURY
Transcriptional regulator, ArsR family protein {ECO:0000313|EMBL:ELY96315.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba t
putative transcriptional regulator
sw_9_scaffold_458_7
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3321..3740
DNA (420bp) protein (140aa)
Endoribonuclease L-PSP n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JU47_NATP1
putative translation initiation inhibitor, yjgF family
Endoribonuclease L-PSP {ECO:0000313|EMBL:ELY69103.1}; Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:AGB33916.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria;
sw_9_scaffold_458_8
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3806..4765)
DNA (960bp) protein (320aa)
Permease n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZM53_9EURY
Permease {ECO:0000313|EMBL:ELY86248.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
permease
sw_9_scaffold_458_9
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4768..5151)
DNA (384bp) protein (128aa)
ArsR family transcriptional regulator n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JNA4_NATP1
putative transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:ELY77653.1}; Putative transcriptional regulator {ECO:0000313|EMBL:AGB31841.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natri
sw_9_scaffold_458_10
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5493..5774)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AQR7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ01036.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
hypothetical protein
sw_9_scaffold_458_11
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6030..6362
DNA (333bp) protein (111aa)
Transposase IS4 family protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AR91_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:ELZ01035.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 1307
transposase (IS4-like)
sw_9_scaffold_458_12
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6406..7122)
DNA (717bp) protein (239aa)
GMP synthase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0L191_9EURY
glutamine amidotransferase
Glutamine amidotransferase {ECO:0000313|EMBL:AJF25832.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;
sw_9_scaffold_458_13
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7220..7999)
DNA (780bp) protein (260aa)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K4G4_9EURY
pca; 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:AAV47354.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
sw_9_scaffold_458_14
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8009..10795)
DNA (2787bp) protein (929aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M910_9EURY
sw_9_scaffold_458_15
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10911..15032)
DNA (4122bp) protein (1374aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037C0FCE
Replication factor C {ECO:0000313|EMBL:ELY59533.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10
replication factor C small subunit
sw_9_scaffold_458_16

Not on your lists

15083..15808
DNA (726bp) protein (242aa)
Peroxiredoxin n=1 Tax=uncultured archaeon A07HR60 RepID=V4YJ73_9ARCH
Peroxiredoxin {ECO:0000313|EMBL:ESS11452.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
alkyl hydroperoxide reductase
sw_9_scaffold_458_17
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15834..16364)
DNA (531bp) protein (177aa)
Acetyltransferase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R7G5_HALMT
hat2; acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AFK20175.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain ATCC 335
sw_9_scaffold_458_18
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16407..17795)
DNA (1389bp) protein (463aa)
Phosphoglucomutase/phosphomannomutase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KXN6_9EURY
Phosphoglucomutase/phosphomannomutase {ECO:0000313|EMBL:EMA26032.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula am
phosphoglucomutase
sw_9_scaffold_458_19
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17888..18037)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Haloarcula hispanica N601 RepID=V5TRN2_HALHI
hypothetical protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:AJF25554.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
sw_9_scaffold_458_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18146..18436)
DNA (291bp) protein (97aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P236_HALMD
excinuclease ABC subunit C
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:ACV47265.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomic
sw_9_scaffold_458_21
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18429..19094)
DNA (666bp) protein (222aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NV11_HALUD
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:ACV12423.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
sw_9_scaffold_458_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19266..19433
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITQ2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48481.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_9_scaffold_458_23
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19453..19632)
DNA (180bp) protein (60aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1417673 species="Archae
Ribose-5-phosphate isomerase A n=2 Tax=Haloarcula hispanica RepID=G0HTK5_HALHT
ribose 5-phosphate isomerase
sw_9_scaffold_458_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19629..19943)
DNA (315bp) protein (105aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=797114 species="Archaea
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CX35_9EURY
sw_9_scaffold_458_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20129..21331
DNA (1203bp) protein (401aa)
Phosphoglucosamine mutase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZ99_9EURY
Phosphoglucosamine mutase {ECO:0000313|EMBL:ELZ27767.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
sw_9_scaffold_458_26
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21383..21541)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CX04_9EURY
hypothetical protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:AJF27392.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
sw_9_scaffold_458_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21582..22337
DNA (756bp) protein (252aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAG5_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA42782.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase/reductase SDR
sw_9_scaffold_458_28
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22334..22912)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NV07_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12419.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_9_scaffold_458_29
unknown

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comp(22940..23191)
DNA (252bp) protein (84aa)

This feature has no annotations

Displaying 29 items

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