ggKbase home page

sw_9_scaffold_485

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_485_1
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..996)
DNA (996bp) protein (332aa)
Tn5-type transposase ISHwa2 n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LI93_HALWC
Tn5-type transposase ISHwa2
ISHwa2-type transposase ISHwa2 {ECO:0000313|EMBL:CCC39813.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi
sw_9_scaffold_485_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1215..2048)
DNA (834bp) protein (278aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFA0_RHOMR
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEN73621.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermu
sw_9_scaffold_485_3
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

comp(2448..3950)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B2EF29
hypothetical protein Tax=CG_Elusi_03
hypothetical protein
sw_9_scaffold_485_4
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4138..5094)
DNA (957bp) protein (319aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R6Q3_PIRSD
Phytanoyl-CoA dioxygenase Tax=RBG_16_Planctomycetes_64_12_curated
phytanoyl-CoA dioxygenase
sw_9_scaffold_485_5
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(5382..7397)
DNA (2016bp) protein (672aa)
Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica (strain SH1) RepID=Q7UY17_RHOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD71832.1}; TaxID=243090 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula bal
sw_9_scaffold_485_6

Not on your lists

comp(7602..9056)
DNA (1455bp) protein (485aa)
N-sulfoglucosamine sulfohydrolase (EC:3.10.1.1)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI0002FE30D2
GHF43 protein {ECO:0000313|EMBL:AEW47967.1}; TaxID=1112296 species="Bacteria; environmental samples.;" source="uncultured bacterium G2_7.;"
sw_9_scaffold_485_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9102..12347)
DNA (3246bp) protein (1082aa)
beta-galactosidase (EC:3.2.1.23)
hypothetical protein n=1 Tax=Virgibacillus halodenitrificans RepID=UPI0002D893B8
Glycoside hydrolase family protein {ECO:0000313|EMBL:ESP87025.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candid
sw_9_scaffold_485_8
unknown

Not on your lists

comp(12481..12615)
DNA (135bp) protein (45aa)

This feature has no annotations

sw_9_scaffold_485_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12975..13799)
DNA (825bp) protein (275aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEA3_RHOM4
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEN72365.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
sw_9_scaffold_485_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13979..14773)
DNA (795bp) protein (265aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJG9_RHOM4
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACY48627.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rho
sw_9_scaffold_485_11
unknown

Not on your lists

comp(15176..15406)
DNA (231bp) protein (77aa)

This feature has no annotations

sw_9_scaffold_485_12
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15483..18353)
DNA (2871bp) protein (957aa)
Alpha-L-rhamnosidase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KR98_HALH1
Alpha-L-rhamnosidase {ECO:0000313|EMBL:AHM62676.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgacea
alpha-L-rhamnosidase
sw_9_scaffold_485_13
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18546..22397)
DNA (3852bp) protein (1284aa)
Similar to ASPIC and UnbV protein containing FG-GAP repeats n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0LBK5_ZOBGA
FG-GAP repeat-containing protein {ECO:0000313|EMBL:AHM59703.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Fla
ASPIC/UnbV-like protein
Displaying 13 items

View Taxonomy