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sw_9_scaffold_564

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_564_1
unknown

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2..82
DNA (81bp) protein (27aa)

This feature has no annotations

sw_9_scaffold_564_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(180..773)
DNA (594bp) protein (198aa)
Putative membrane protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NGJ6_9EURY
Putative membrane protein {ECO:0000313|EMBL:ERG96250.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07H
hypothetical protein
sw_9_scaffold_564_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1251..2393
DNA (1143bp) protein (381aa)
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3] id=24616560 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobac
pyrC; dihydroorotase (EC:3.5.2.3)
sw_9_scaffold_564_4

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comp(2422..3258)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y0Q2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS04502.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_9_scaffold_564_5

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3471..3995
DNA (525bp) protein (175aa)
Acetyltransferase n=1 Tax=uncultured archaeon A07HR67 RepID=V4X9L3_9ARCH
Acetyltransferase {ECO:0000313|EMBL:ESS04504.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
N-acetyltransferase GCN5
sw_9_scaffold_564_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4039..4482)
DNA (444bp) protein (148aa)
Universal stress protein UspA n=3 Tax=Haloarcula RepID=V5TPX2_HALHI
universal stress protein UspA
UspA domain protein {ECO:0000313|EMBL:ACV46360.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (str
sw_9_scaffold_564_7

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4563..5033
DNA (471bp) protein (157aa)
Universal stress protein UspA related nucleotide-binding protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XWC6_9ARCH
Universal stress protein UspA related nucleotide-binding protein {ECO:0000313|EMBL:ESS04506.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
universal stress protein uspa-like protein
sw_9_scaffold_564_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5183..6163
DNA (981bp) protein (327aa)
recJ5; RecJ-like exonuclease id=24645530 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative phosphohydrolase (DHH superfamily) {ECO:0000313|EMBL:ERH09743.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
RecJ-like exonuclease
sw_9_scaffold_564_9
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6164..6604)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LJU0_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA33887.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_9_scaffold_564_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6754..7089)
DNA (336bp) protein (112aa)
Helix-turn-helix domain protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIX3_9EURY
transcriptional regulator-like protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ERJ05926.1}; Transcriptional regulator-like protein {ECO:0000313|EMBL:CCQ32939.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Haloba
sw_9_scaffold_564_11
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7241..7969)
DNA (729bp) protein (243aa)
Circadian regulator n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0K572_9EURY
kaiC2; circadian regulator
Circadian regulator {ECO:0000313|EMBL:EMA10836.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 297
sw_9_scaffold_564_12

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comp(8369..9838)
DNA (1470bp) protein (490aa)
Putative ATPase n=1 Tax=uncultured archaeon A07HR67 RepID=V4X9L7_9ARCH
Putative ATPase {ECO:0000313|EMBL:ESS04509.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_9_scaffold_564_13

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10155..10541
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZPG9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS04510.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_9_scaffold_564_14

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10635..10775
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XWC9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS04511.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_9_scaffold_564_15

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10756..10917
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XWC9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS04511.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_9_scaffold_564_16

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comp(10924..11751)
DNA (828bp) protein (276aa)
5molybdopterin synthase subunit MoaE n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y0R2_9ARCH
5molybdopterin synthase subunit MoaE {ECO:0000313|EMBL:ESS04512.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE
sw_9_scaffold_564_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11803..12279)
DNA (477bp) protein (159aa)
Probable cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGQ4_9EURY
Probable cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=797114 spec
molybdenum cofactor biosynthesis protein C
sw_9_scaffold_564_18

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comp(12276..12821)
DNA (546bp) protein (182aa)
Molybdopterin biosynthesis enzyme n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZPH0_9ARCH
Molybdopterin biosynthesis enzyme {ECO:0000313|EMBL:ESS04515.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
molybdenum cofactor synthesis domain protein
sw_9_scaffold_564_19

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12996..13175
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XWD4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS04516.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_9_scaffold_564_20

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13178..13735
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y0R8_9ARCH
UPF0215 protein A07HR67_00688 {ECO:0000256|HAMAP-Rule:MF_00582}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_9_scaffold_564_21
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13785..14429
DNA (645bp) protein (215aa)
DNA polymerase bacteriophage-type protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2E5U5_9EURY
DNA polymerase
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:CCQ33472.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhab
sw_9_scaffold_564_22

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comp(14614..15711)
DNA (1098bp) protein (366aa)
Poly(3-hydroxyalkanoate) synthetase n=1 Tax=uncultured archaeon A07HR67 RepID=V4X9M5_9ARCH
Poly(3-hydroxyalkanoate) synthetase {ECO:0000313|EMBL:ESS04519.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
poly(R)-hydroxyalkanoic acid synthase subunit PhaC
sw_9_scaffold_564_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(15874..16518)
DNA (645bp) protein (215aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
hisH1; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2Q9_9EURY
sw_9_scaffold_564_24
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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16739..17743
DNA (1005bp) protein (335aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6U3_HALXS
phosphonate ABC transporter periplasmic phosphonate-binding protein
Phosphonate ABC transporter, periplasmic phosphonate-binding protein {ECO:0000313|EMBL:AEH35772.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;
sw_9_scaffold_564_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17904..18203
DNA (300bp) protein (100aa)
Transposase, is605 orfb family n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP98_9EURY
Transposase, is605 orfb family {ECO:0000313|EMBL:ELZ24227.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
transposase, is605 orfb family, central region
sw_9_scaffold_564_26

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18231..18635
DNA (405bp) protein (135aa)
phosphonate ABC transporter ATPase (EC:3.6.3.28)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultu
ABC transporter n=1 Tax=Halorubrum sp. T3 RepID=UPI0003665F6D
sw_9_scaffold_564_27

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comp(18743..18925)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AUB3_MARSH
Marine sediment metagenome DNA, contig: S06H3_S14387 {ECO:0000313|EMBL:GAI38941.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Displaying 27 items

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